[mira_talk] Re: Scaffolding MIRA results with BAMBUS: a primer
- From: "Martin A. Hansen" <mail@xxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Tue, 1 Sep 2009 08:31:26 +0200
That does indeed look very useful!
Martin
On Tue, Sep 1, 2009 at 12:16 AM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote:
> Dear all,
>
> Gregory Harhay from the USDA has written an excellent primer on how he uses
> BAMBUS to scaffold MIRA results. I'll distribute it along the next
> releases,
> in the mean time you can find it in the online "Manuals" section on the
> MIRA
> website:
> http://www.chevreux.org/mira_manuals.html
>
> He shows an example for how to do it with a 25kb paired-end library.
> Adapting
> to other library sizes or for projects with different library sizes should
> be
> doable with a bit of reading manuals (MIRA & BAMBUS) :-)
>
> This is the first third-party documentation received (yay!) and I'd like to
> thank Greg wholeheartedly for this as I know it'll help out a few people.
>
> Best,
> Bastien
>
> PS: In other news, the final release of MIRA 3 is being delayed by
> something I
> don't know whether it's a true memory leak or memory fragmentation eating
> up
> available memory. The joys of millions of reads ... *sigh*
>
> --
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