[mira_talk] Re: Hash frequency specification (precomputation)
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Sun, 23 Oct 2011 22:20:46 +0200
On Sunday 23 October 2011 22:14:03 Robert Bruccoleri wrote:
> I am working on a problem where I can precompute hash frequencies in
> advance of an assembly. I want to use this information to assemble short
> regions of my genome. Is it possible to specify the hash frequencies on
> a set of reads as input?
Ummm ... say again?
The only thing I could think of would be to give MIRA the average expected
hash frequency instead of computing it. Is this what you were asking? (and
then the answer would be "no, not at the moment")
B.
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