[mira_talk] Re: Bug report

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Tue, 19 Apr 2011 15:11:55 +0200

On Apr 19, 2011, at 14:35 , Marshall Hampton wrote:
> I am getting the following error on a lot of little assemblies I am
> doing right now.  They are 454 and solexa combinations.  The solexa
> data might have been preprocessed in a suboptimal way.
> 
> My input can be found at:
> http://www.d.umn.edu/~mhampton/LRP2.tar.gz
> I used mira 3.2.1.15.

Ummm ... strange. I tested with your input like this:

  mira --project=LRP2_mm -job=denovo,genome,accurate,solexa,454

and the assembly went through without any problem.

What command line are you using?

B.


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