[codeface] Re: Failure during Vagrant Installation
- From: "Kuppelwieser, Stefan" <Stefan.Kuppelwieser@xxxxxxxxxx>
- To: "codeface@xxxxxxxxxxxxx" <codeface@xxxxxxxxxxxxx>
- Date: Fri, 10 Mar 2017 15:23:57 +0000
Hello Claus,
I retried it, but I get the same Error.
I have clone your branch again on my local machine and run vagrant up. (14.04)
During the installing I get the same error like last week.
It begins at line 5243. [1]
After the Installation I run the .sh Scripts, but it fails (again) too.
vagrant@vagrant-ubuntu-trusty-64:/vagrant$
./integration-scripts/install_common.sh
Providing common binaries and libraries
nodejs is /usr/bin/nodejs
ln: failed to create symbolic link '/usr/bin/nodejs': File exists
vagrant@vagrant-ubuntu-trusty-64:/vagrant$ sudo
./integration-scripts/install_common.sh
Providing common binaries and libraries
nodejs is /usr/bin/nodejs
ln: failed to create symbolic link '/usr/bin/nodejs': File exists
[1] Attachment: log.txt
---
Best wishes,
Stefan Kuppelwieser
-----Original Message-----
From: codeface-bounce@xxxxxxxxxxxxx [mailto:codeface-bounce@xxxxxxxxxxxxx] On ;
Behalf Of Claus Hunsen
Sent: Friday, March 10, 2017 2:57 PM
To: codeface@xxxxxxxxxxxxx
Subject: [codeface] Re: Failure during Vagrant Installation
Hello Stefan,
I can give a short follow-up: I have re-installed my VM (14.04) yesterday
(based on my current branch) and everything worked flawlessly.
Do you still have problems?
-- Claus
On 02/03/17 13:00, Claus Hunsen wrote:
Hello Stefan,
sorry for taking so long for an answer, I guess, everyone is kinda
busy these days.
Regarding your installation problems: There are several issues during
your installation (also referring to
<https://github.com/siemens/codeface/issues/58>):
1) You cannot download various R source packages.
In the log that is attached to your message to the mailing list, these
download errors are not occurring anymore. I guess, your Internet
uplink failed to some reason during the installation. Please make sure
you have a stable connection to the Internet. Alternatively, the
R-packages mirror was probably down to some reason. But, both reasons
can unfortunately only be circumvented by retrying...
2) cppstats could not be installed properly (Line 5395).
This issue has been fixed on my branch [1], but the patches are not
merged to siemens/codeface/master yet [2]. As you can see in the
TravisCI log [3], the issue is indeed fixed.
Please checkout my branch [1] and try the Vagrant installation based
on this particular branch.
3) The installation of the ID service failed (Lines 5183 and 5408).
If the problem persists after using my branch for the Codeface
installation (see point 2)), do the following: Please log into the VM
using "vagrant ssh" (or running the machine from VirtualBox) and run
the following commands:
cd /vagrant/
./integration-scripts/install_common.sh
./integration-scripts/install_codeface_node.sh
Afterwards, the ID service should be functional. Sometimes, Vagrant
simply gets a hiccup and does not perform certain commands.
In summary, please try my branch [1] for retrying the installation. If
any further problems occur, do not hesitate to ask for help. This
time, we will respond faster. ;)
Best,
Claus
[1] <https://github.com/clhunsen/codeface/tree/claus-updates>
[2] <https://github.com/siemens/codeface/pull/57>
[3] <https://travis-ci.org/siemens/codeface/builds/203601483>
On 16/02/17 18:18, Kuppelwieser, Stefan wrote:
Hello,
I want to install Codeface on my local Windows 10 x64 Machine.
As prerequisite I have installed:
* vagrant
* virtual box
* git bash
I have followed the instruction from the wiki for installation with vagrant.
Unfortunately I get always an error. Something can't download. I
tried it to download it manual - it works.
In the appendix is the log file from codeface.
Can somebody help me.
I dont know how I can fixed that.
Thank you very much.
Best wishes,
Stefan Kuppelwieser
______________________________________________________________
Krones AG
Vorstand: Christoph Klenk, Vorstandsvorsitzender,
Michael Andersen, Rainulf Diepold, Thomas Ricker, Markus Tischer,
Ralf Goldbrunner
Vorsitzender des Aufsichtsrats: Volker Kronseder
Registergericht: Regensburg HRB 23 44, Umsatzsteuer-ID-Nummer: DE 133
695 999
______________________________________________________________
Der Inhalt dieser E-Mail und jeder Anhang ist vertraulich.
Diese Inhalte sind nur fuer die benannten Adressaten.
Wenn Sie diese E-Mail durch einen Fehler erhalten haben,
benachrichtigen Sie sofort Ihren Administrator oder den Absender.
Behandeln Sie die E-Mail vertraulich.
* Diese E-Mail wurde auf Viren und gefaehrlichen Inhalt geprueft. *
______________________________________________________________
The contents of this email and any attachments are confidential.
They are intended for the named recipient(s) only.
If you have received this email in error please notify the system
manager or the sender immediately and do not disclose the contents to
anyone or make copies.
* This e-Mail was scanned for viruses, vandals and malicious content.
*
______________________________________________________________
Krones AG
Vorstand: Christoph Klenk, Vorstandsvorsitzender,
Michael Andersen, Rainulf Diepold, Thomas Ricker, Markus Tischer, Ralf
Goldbrunner
Vorsitzender des Aufsichtsrats: Volker Kronseder
Registergericht: Regensburg HRB 23 44, Umsatzsteuer-ID-Nummer: DE 133 695 999
______________________________________________________________
Der Inhalt dieser E-Mail und jeder Anhang ist vertraulich.
Diese Inhalte sind nur fuer die benannten Adressaten.
Wenn Sie diese E-Mail durch einen Fehler erhalten haben,
benachrichtigen Sie sofort Ihren Administrator oder den Absender.
Behandeln Sie die E-Mail vertraulich.
* Diese E-Mail wurde auf Viren und gefaehrlichen Inhalt geprueft. *
______________________________________________________________
The contents of this email and any attachments are confidential.
They are intended for the named recipient(s) only.
If you have received this email in error please notify the system manager
or the sender immediately and do not disclose the contents to anyone or
make copies.
* This e-Mail was scanned for viruses, vandals and malicious content. *
Bringing machine 'default' up with 'virtualbox' provider...
==> default: Importing base box 'ubuntu/trusty64'...
[KProgress: 90%
[K==> default: Matching MAC address for NAT networking...
==> default: Checking if box 'ubuntu/trusty64' is up to date...
==> default: A newer version of the box 'ubuntu/trusty64' is available! You
currently
==> default: have version '20161214.0.0'. The latest is version '20170222.0.1'.
Run
==> default: `vagrant box update` to update.
==> default: Setting the name of the VM:
codeface-claus-update_default_1488567207224_7342
==> default: Clearing any previously set forwarded ports...
==> default: Clearing any previously set network interfaces...
==> default: Preparing network interfaces based on configuration...
default: Adapter 1: nat
==> default: Forwarding ports...
default: 8081 (guest) => 8081 (host) (adapter 1)
default: 8100 (guest) => 8100 (host) (adapter 1)
default: 22 (guest) => 2222 (host) (adapter 1)
==> default: Running 'pre-boot' VM customizations...
==> default: Booting VM...
==> default: Waiting for machine to boot. This may take a few minutes...
default: SSH address: 127.0.0.1:2222
default: SSH username: vagrant
default: SSH auth method: private key
default:
default: Vagrant insecure key detected. Vagrant will automatically replace
default: this with a newly generated keypair for better security.
default:
default: Inserting generated public key within guest...
default: Removing insecure key from the guest if it's present...
default: Key inserted! Disconnecting and reconnecting using new SSH key...
==> default: Machine booted and ready!
==> default: Checking for guest additions in VM...
default: The guest additions on this VM do not match the installed version
of
default: VirtualBox! In most cases this is fine, but in rare cases it can
default: prevent things such as shared folders from working properly. If
you see
default: shared folder errors, please make sure the guest additions within
the
default: virtual machine match the version of VirtualBox you have installed
on
default: your host and reload your VM.
default:
default: Guest Additions Version: 4.3.36
default: VirtualBox Version: 5.1
==> default: Mounting shared folders...
default: /vagrant => D:/Vagrant/codeface-claus-update
==> default: Running provisioner: fix-no-tty (shell)...
default: Running: inline script
==> default: stdin: is not a tty
==> default: Running provisioner: build (shell)...
default: Running: inline script
==> default: Selecting previously unselected package python-software-properties.
==> default: (Reading database ... 63024 files and directories currently
installed.)
==> default: Preparing to unpack
.../python-software-properties_0.92.37.7_all.deb ...
==> default: Unpacking python-software-properties (0.92.37.7) ...
==> default: Setting up python-software-properties (0.92.37.7) ...
==> default: Adding R cran repositories
==> default: deb
http://cran.rstudio.com/bin/linux/ubuntu trusty/
==> default: gpg:
==> default: directory `/home/vagrant/.gnupg' created
==> default: gpg:
==> default: new configuration file `/home/vagrant/.gnupg/gpg.conf' created
==> default: gpg:
==> default: WARNING: options in `/home/vagrant/.gnupg/gpg.conf' are not yet
active during this run
==> default: gpg:
==> default: keyring `/home/vagrant/.gnupg/secring.gpg' created
==> default: gpg:
==> default: keyring `/home/vagrant/.gnupg/pubring.gpg' created
==> default: gpg:
==> default: requesting key E084DAB9 from hkp server keyserver.ubuntu.com
==> default: gpg:
==> default: /home/vagrant/.gnupg/trustdb.gpg: trustdb created
==> default: gpg:
==> default: key E084DAB9: public key "Michael Rutter <marutter@xxxxxxxxx>"
imported
==> default: gpg:
==> default: Total number processed: 1
==> default: gpg:
==> default: imported: 1
==> default: (RSA: 1)
==> default: OK
==> default: Providing common binaries and libraries
==> default:
Extracting templates from packages: 7%
==> default:
Extracting templates from packages: 15%
==> default:
Extracting templates from packages: 23%
==> default:
Extracting templates from packages: 30%
==> default:
Extracting templates from packages: 38%
==> default:
Extracting templates from packages: 46%
==> default:
Extracting templates from packages: 53%
==> default:
Extracting templates from packages: 61%
==> default:
Extracting templates from packages: 69%
==> default:
Extracting templates from packages: 77%
==> default:
Extracting templates from packages: 84%
==> default:
Extracting templates from packages: 92%
==> default:
Extracting templates from packages: 100%
==> default: Preconfiguring packages ...
==> default: (Reading database ... 63040 files and directories currently
installed.)
==> default: Preparing to unpack
.../libgnutls-openssl27_2.12.23-12ubuntu2.6_amd64.deb ...
==> default: Unpacking libgnutls-openssl27:amd64 (2.12.23-12ubuntu2.6) over
(2.12.23-12ubuntu2.5) ...
==> default: Preparing to unpack .../libgnutls26_2.12.23-12ubuntu2.6_amd64.deb
...
==> default: Unpacking libgnutls26:amd64 (2.12.23-12ubuntu2.6) over
(2.12.23-12ubuntu2.5) ...
==> default: Preparing to unpack .../libssl1.0.0_1.0.1f-1ubuntu2.22_amd64.deb
...
==> default: Unpacking libssl1.0.0:amd64 (1.0.1f-1ubuntu2.22) over
(1.0.1f-1ubuntu2.21) ...
==> default: Preparing to unpack
.../libk5crypto3_1.12+dfsg-2ubuntu5.3_amd64.deb ...
==> default: Unpacking libk5crypto3:amd64 (1.12+dfsg-2ubuntu5.3) over
(1.12+dfsg-2ubuntu5.2) ...
==> default: Preparing to unpack
.../libgssapi-krb5-2_1.12+dfsg-2ubuntu5.3_amd64.deb ...
==> default: Unpacking libgssapi-krb5-2:amd64 (1.12+dfsg-2ubuntu5.3) over
(1.12+dfsg-2ubuntu5.2) ...
==> default: Preparing to unpack .../libkrb5-3_1.12+dfsg-2ubuntu5.3_amd64.deb
...
==> default: Unpacking libkrb5-3:amd64 (1.12+dfsg-2ubuntu5.3) over
(1.12+dfsg-2ubuntu5.2) ...
==> default: Preparing to unpack
.../libkrb5support0_1.12+dfsg-2ubuntu5.3_amd64.deb ...
==> default: Unpacking libkrb5support0:amd64 (1.12+dfsg-2ubuntu5.3) over
(1.12+dfsg-2ubuntu5.2) ...
==> default: Selecting previously unselected package libaio1:amd64.
==> default: Preparing to unpack .../libaio1_0.3.109-4_amd64.deb ...
==> default: Unpacking libaio1:amd64 (0.3.109-4) ...
==> default: Selecting previously unselected package libapr1:amd64.
==> default: Preparing to unpack .../libapr1_1.5.0-1_amd64.deb ...
==> default: Unpacking libapr1:amd64 (1.5.0-1) ...
==> default: Selecting previously unselected package libaprutil1:amd64.
==> default: Preparing to unpack .../libaprutil1_1.5.3-1_amd64.deb ...
==> default: Unpacking libaprutil1:amd64 (1.5.3-1) ...
==> default: Selecting previously unselected package liblzo2-2:amd64.
==> default: Preparing to unpack .../liblzo2-2_2.06-1.2ubuntu1.1_amd64.deb ...
==> default: Unpacking liblzo2-2:amd64 (2.06-1.2ubuntu1.1) ...
==> default: Selecting previously unselected package libnettle4:amd64.
==> default: Preparing to unpack .../libnettle4_2.7.1-1ubuntu0.2_amd64.deb ...
==> default: Unpacking libnettle4:amd64 (2.7.1-1ubuntu0.2) ...
==> default: Selecting previously unselected package libarchive13:amd64.
==> default: Preparing to unpack .../libarchive13_3.1.2-7ubuntu2.3_amd64.deb ...
==> default: Unpacking libarchive13:amd64 (3.1.2-7ubuntu2.3) ...
==> default: Selecting previously unselected package libasyncns0:amd64.
==> default: Preparing to unpack .../libasyncns0_0.8-4ubuntu2_amd64.deb ...
==> default: Unpacking libasyncns0:amd64 (0.8-4ubuntu2) ...
==> default: Selecting previously unselected package libatasmart4:amd64.
==> default: Preparing to unpack .../libatasmart4_0.19-3_amd64.deb ...
==> default: Unpacking libatasmart4:amd64 (0.19-3) ...
==> default: Selecting previously unselected package libgtk2.0-common.
==> default: Preparing to unpack
.../libgtk2.0-common_2.24.23-0ubuntu1.4_all.deb ...
==> default: Unpacking libgtk2.0-common (2.24.23-0ubuntu1.4) ...
==> default: Preparing to unpack .../libcups2_1.7.2-0ubuntu1.8_amd64.deb ...
==> default: Unpacking libcups2:amd64 (1.7.2-0ubuntu1.8) over
(1.7.2-0ubuntu1.7) ...
==> default: Selecting previously unselected package libgtk2.0-0:amd64.
==> default: Preparing to unpack .../libgtk2.0-0_2.24.23-0ubuntu1.4_amd64.deb
...
==> default: Unpacking libgtk2.0-0:amd64 (2.24.23-0ubuntu1.4) ...
==> default: Selecting previously unselected package libnspr4:amd64.
==> default: Preparing to unpack
.../libnspr4_2%3a4.12-0ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking libnspr4:amd64 (2:4.12-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package libnss3-nssdb.
==> default: Preparing to unpack
.../libnss3-nssdb_2%3a3.26.2-0ubuntu0.14.04.3_all.deb ...
==> default: Unpacking libnss3-nssdb (2:3.26.2-0ubuntu0.14.04.3) ...
==> default: Selecting previously unselected package libnss3:amd64.
==> default: Preparing to unpack
.../libnss3_2%3a3.26.2-0ubuntu0.14.04.3_amd64.deb ...
==> default: Unpacking libnss3:amd64 (2:3.26.2-0ubuntu0.14.04.3) ...
==> default: Selecting previously unselected package ca-certificates-java.
==> default: Preparing to unpack
.../ca-certificates-java_20130815ubuntu1_all.deb ...
==> default: Unpacking ca-certificates-java (20130815ubuntu1) ...
==> default: Selecting previously unselected package tzdata-java.
==> default: Preparing to unpack .../tzdata-java_2016j-0ubuntu0.14.04_all.deb
...
==> default: Unpacking tzdata-java (2016j-0ubuntu0.14.04) ...
==> default: Selecting previously unselected package java-common.
==> default: Preparing to unpack .../java-common_0.51_all.deb ...
==> default: Unpacking java-common (0.51) ...
==> default: Selecting previously unselected package libpcsclite1:amd64.
==> default: Preparing to unpack .../libpcsclite1_1.8.10-1ubuntu1.1_amd64.deb
...
==> default: Unpacking libpcsclite1:amd64 (1.8.10-1ubuntu1.1) ...
==> default: Selecting previously unselected package libflac8:amd64.
==> default: Preparing to unpack .../libflac8_1.3.0-2ubuntu0.14.04.1_amd64.deb
...
==> default: Unpacking libflac8:amd64 (1.3.0-2ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package libvorbisenc2:amd64.
==> default: Preparing to unpack .../libvorbisenc2_1.3.2-1.3ubuntu1_amd64.deb
...
==> default: Unpacking libvorbisenc2:amd64 (1.3.2-1.3ubuntu1) ...
==> default: Selecting previously unselected package libsndfile1:amd64.
==> default: Preparing to unpack .../libsndfile1_1.0.25-7ubuntu2.1_amd64.deb ...
==> default: Unpacking libsndfile1:amd64 (1.0.25-7ubuntu2.1) ...
==> default: Selecting previously unselected package libpulse0:amd64.
==> default: Preparing to unpack .../libpulse0_1%3a4.0-0ubuntu11.1_amd64.deb ...
==> default: Unpacking libpulse0:amd64 (1:4.0-0ubuntu11.1) ...
==> default: Selecting previously unselected package libsctp1:amd64.
==> default: Preparing to unpack .../libsctp1_1.0.15+dfsg-1_amd64.deb ...
==> default: Unpacking libsctp1:amd64 (1.0.15+dfsg-1) ...
==> default: Selecting previously unselected package
openjdk-7-jre-headless:amd64.
==> default: Preparing to unpack
.../openjdk-7-jre-headless_7u121-2.6.8-1ubuntu0.14.04.3_amd64.deb ...
==> default: Unpacking openjdk-7-jre-headless:amd64
(7u121-2.6.8-1ubuntu0.14.04.3) ...
==> default: Selecting previously unselected package default-jre-headless.
==> default: Preparing to unpack .../default-jre-headless_2%3a1.7-51_amd64.deb
...
==> default: Unpacking default-jre-headless (2:1.7-51) ...
==> default: Selecting previously unselected package libgif4:amd64.
==> default: Preparing to unpack .../libgif4_4.1.6-11_amd64.deb ...
==> default: Unpacking libgif4:amd64 (4.1.6-11) ...
==> default: Selecting previously unselected package openjdk-7-jre:amd64.
==> default: Preparing to unpack
.../openjdk-7-jre_7u121-2.6.8-1ubuntu0.14.04.3_amd64.deb ...
==> default: Unpacking openjdk-7-jre:amd64 (7u121-2.6.8-1ubuntu0.14.04.3) ...
==> default: Selecting previously unselected package default-jre.
==> default: Preparing to unpack .../default-jre_2%3a1.7-51_amd64.deb ...
==> default: Unpacking default-jre (2:1.7-51) ...
==> default: Selecting previously unselected package libatk-wrapper-java.
==> default: Preparing to unpack .../libatk-wrapper-java_0.30.4-4_all.deb ...
==> default: Unpacking libatk-wrapper-java (0.30.4-4) ...
==> default: Selecting previously unselected package
libatk-wrapper-java-jni:amd64.
==> default: Preparing to unpack .../libatk-wrapper-java-jni_0.30.4-4_amd64.deb
...
==> default: Unpacking libatk-wrapper-java-jni:amd64 (0.30.4-4) ...
==> default: Selecting previously unselected package libavahi-glib1:amd64.
==> default: Preparing to unpack .../libavahi-glib1_0.6.31-4ubuntu1.1_amd64.deb
...
==> default: Unpacking libavahi-glib1:amd64 (0.6.31-4ubuntu1.1) ...
==> default: Selecting previously unselected package libbonobo2-common.
==> default: Preparing to unpack .../libbonobo2-common_2.32.1-0ubuntu5_all.deb
...
==> default: Unpacking libbonobo2-common (2.32.1-0ubuntu5) ...
==> default: Selecting previously unselected package libidl-common.
==> default: Preparing to unpack .../libidl-common_0.8.14-0.2ubuntu4_all.deb ...
==> default: Unpacking libidl-common (0.8.14-0.2ubuntu4) ...
==> default: Selecting previously unselected package libidl0:amd64.
==> default: Preparing to unpack .../libidl0_0.8.14-0.2ubuntu4_amd64.deb ...
==> default: Unpacking libidl0:amd64 (0.8.14-0.2ubuntu4) ...
==> default: Selecting previously unselected package liborbit-2-0:amd64.
==> default: Preparing to unpack .../liborbit-2-0_1%3a2.14.19-0.3_amd64.deb ...
==> default: Unpacking liborbit-2-0:amd64 (1:2.14.19-0.3) ...
==> default: Selecting previously unselected package liborbit2:amd64.
==> default: Preparing to unpack .../liborbit2_1%3a2.14.19-0.3_amd64.deb ...
==> default: Unpacking liborbit2:amd64 (1:2.14.19-0.3) ...
==> default: Selecting previously unselected package libbonobo2-0:amd64.
==> default: Preparing to unpack .../libbonobo2-0_2.32.1-0ubuntu5_amd64.deb ...
==> default: Unpacking libbonobo2-0:amd64 (2.32.1-0ubuntu5) ...
==> default: Selecting previously unselected package
libboost-system1.54.0:amd64.
==> default: Preparing to unpack
.../libboost-system1.54.0_1.54.0-4ubuntu3.1_amd64.deb ...
==> default: Unpacking libboost-system1.54.0:amd64 (1.54.0-4ubuntu3.1) ...
==> default: Selecting previously unselected package
libcairo-script-interpreter2:amd64.
==> default: Preparing to unpack
.../libcairo-script-interpreter2_1.13.0~20140204-0ubuntu1.1_amd64.deb ...
==> default: Unpacking libcairo-script-interpreter2:amd64
(1.13.0~20140204-0ubuntu1.1) ...
==> default: Selecting previously unselected package libcupsfilters1:amd64.
==> default: Preparing to unpack
.../libcupsfilters1_1.0.52-0ubuntu1.7_amd64.deb ...
==> default: Unpacking libcupsfilters1:amd64 (1.0.52-0ubuntu1.7) ...
==> default: Selecting previously unselected package libcupsimage2:amd64.
==> default: Preparing to unpack .../libcupsimage2_1.7.2-0ubuntu1.8_amd64.deb
...
==> default: Unpacking libcupsimage2:amd64 (1.7.2-0ubuntu1.8) ...
==> default: Selecting previously unselected package libdmx1:amd64.
==> default: Preparing to unpack .../libdmx1_1%3a1.1.3-1_amd64.deb ...
==> default: Unpacking libdmx1:amd64 (1:1.1.3-1) ...
==> default: Selecting previously unselected package libdrm-amdgpu1:amd64.
==> default: Preparing to unpack
.../libdrm-amdgpu1_2.4.67-1ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking libdrm-amdgpu1:amd64 (2.4.67-1ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package libwayland-server0:amd64.
==> default: Preparing to unpack
.../libwayland-server0_1.4.0-1ubuntu1_amd64.deb ...
==> default: Unpacking libwayland-server0:amd64 (1.4.0-1ubuntu1) ...
==> default: Selecting previously unselected package libgbm1:amd64.
==> default: Preparing to unpack .../libgbm1_10.1.3-0ubuntu0.6_amd64.deb ...
==> default: Unpacking libgbm1:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package libxcb-xfixes0:amd64.
==> default: Preparing to unpack .../libxcb-xfixes0_1.10-2ubuntu1_amd64.deb ...
==> default: Unpacking libxcb-xfixes0:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libegl1-mesa:amd64.
==> default: Preparing to unpack .../libegl1-mesa_10.1.3-0ubuntu0.6_amd64.deb
...
==> default: Unpacking libegl1-mesa:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package libopenvg1-mesa:amd64.
==> default: Preparing to unpack
.../libopenvg1-mesa_10.1.3-0ubuntu0.6_amd64.deb ...
==> default: Unpacking libopenvg1-mesa:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package libwayland-egl1-mesa:amd64.
==> default: Preparing to unpack
.../libwayland-egl1-mesa_10.1.3-0ubuntu0.6_amd64.deb ...
==> default: Unpacking libwayland-egl1-mesa:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package libegl1-mesa-drivers:amd64.
==> default: Preparing to unpack
.../libegl1-mesa-drivers_10.1.3-0ubuntu0.6_amd64.deb ...
==> default: Unpacking libegl1-mesa-drivers:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package libelfg0:amd64.
==> default: Preparing to unpack .../libelfg0_0.8.13-5_amd64.deb ...
==> default: Unpacking libelfg0:amd64 (0.8.13-5) ...
==> default: Selecting previously unselected package libfs6:amd64.
==> default: Preparing to unpack .../libfs6_2%3a1.0.5-1_amd64.deb ...
==> default: Unpacking libfs6:amd64 (2:1.0.5-1) ...
==> default: Selecting previously unselected package gconf2-common.
==> default: Preparing to unpack .../gconf2-common_3.2.6-0ubuntu2_all.deb ...
==> default: Unpacking gconf2-common (3.2.6-0ubuntu2) ...
==> default: Selecting previously unselected package libgconf-2-4:amd64.
==> default: Preparing to unpack .../libgconf-2-4_3.2.6-0ubuntu2_amd64.deb ...
==> default: Unpacking libgconf-2-4:amd64 (3.2.6-0ubuntu2) ...
==> default: Selecting previously unselected package libgfortran3:amd64.
==> default: Preparing to unpack
.../libgfortran3_4.8.4-2ubuntu1~14.04.3_amd64.deb ...
==> default: Unpacking libgfortran3:amd64 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Selecting previously unselected package libglade2-0:amd64.
==> default: Preparing to unpack .../libglade2-0_1%3a2.6.4-2_amd64.deb ...
==> default: Unpacking libglade2-0:amd64 (1:2.6.4-2) ...
==> default: Selecting previously unselected package libgles2-mesa:amd64.
==> default: Preparing to unpack .../libgles2-mesa_10.1.3-0ubuntu0.6_amd64.deb
...
==> default: Unpacking libgles2-mesa:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package gconf-service-backend.
==> default: Preparing to unpack
.../gconf-service-backend_3.2.6-0ubuntu2_amd64.deb ...
==> default: Unpacking gconf-service-backend (3.2.6-0ubuntu2) ...
==> default: Selecting previously unselected package gconf-service.
==> default: Preparing to unpack .../gconf-service_3.2.6-0ubuntu2_amd64.deb ...
==> default: Unpacking gconf-service (3.2.6-0ubuntu2) ...
==> default: Selecting previously unselected package dbus-x11.
==> default: Preparing to unpack .../dbus-x11_1.6.18-0ubuntu4.5_amd64.deb ...
==> default: Unpacking dbus-x11 (1.6.18-0ubuntu4.5) ...
==> default: Selecting previously unselected package gconf2.
==> default: Preparing to unpack .../gconf2_3.2.6-0ubuntu2_amd64.deb ...
==> default: Unpacking gconf2 (3.2.6-0ubuntu2) ...
==> default: Selecting previously unselected package libgnomevfs2-common.
==> default: Preparing to unpack
.../libgnomevfs2-common_1%3a2.24.4-1ubuntu6_amd64.deb ...
==> default: Unpacking libgnomevfs2-common (1:2.24.4-1ubuntu6) ...
==> default: Selecting previously unselected package libgnomevfs2-0:amd64.
==> default: Preparing to unpack
.../libgnomevfs2-0_1%3a2.24.4-1ubuntu6_amd64.deb ...
==> default: Unpacking libgnomevfs2-0:amd64 (1:2.24.4-1ubuntu6) ...
==> default: Selecting previously unselected package libgnome2-common.
==> default: Preparing to unpack .../libgnome2-common_2.32.1-4ubuntu1_all.deb
...
==> default: Unpacking libgnome2-common (2.32.1-4ubuntu1) ...
==> default: Selecting previously unselected package libgnome2-bin.
==> default: Preparing to unpack .../libgnome2-bin_2.32.1-4ubuntu1_amd64.deb ...
==> default: Unpacking libgnome2-bin (2.32.1-4ubuntu1) ...
==> default: Selecting previously unselected package libgnome2-0:amd64.
==> default: Preparing to unpack .../libgnome2-0_2.32.1-4ubuntu1_amd64.deb ...
==> default: Unpacking libgnome2-0:amd64 (2.32.1-4ubuntu1) ...
==> default: Selecting previously unselected package libgssrpc4:amd64.
==> default: Preparing to unpack .../libgssrpc4_1.12+dfsg-2ubuntu5.3_amd64.deb
...
==> default: Unpacking libgssrpc4:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Selecting previously unselected package libhunspell-1.3-0:amd64.
==> default: Preparing to unpack
.../libhunspell-1.3-0_1.3.2-6ubuntu2.1_amd64.deb ...
==> default: Unpacking libhunspell-1.3-0:amd64 (1.3.2-6ubuntu2.1) ...
==> default: Selecting previously unselected package libkadm5clnt-mit9:amd64.
==> default: Preparing to unpack
.../libkadm5clnt-mit9_1.12+dfsg-2ubuntu5.3_amd64.deb ...
==> default: Unpacking libkadm5clnt-mit9:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Selecting previously unselected package libkdb5-7:amd64.
==> default: Preparing to unpack .../libkdb5-7_1.12+dfsg-2ubuntu5.3_amd64.deb
...
==> default: Unpacking libkdb5-7:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Selecting previously unselected package libkadm5srv-mit9:amd64.
==> default: Preparing to unpack
.../libkadm5srv-mit9_1.12+dfsg-2ubuntu5.3_amd64.deb ...
==> default: Unpacking libkadm5srv-mit9:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Selecting previously unselected package libprotobuf8:amd64.
==> default: Preparing to unpack .../libprotobuf8_2.5.0-9ubuntu1_amd64.deb ...
==> default: Unpacking libprotobuf8:amd64 (2.5.0-9ubuntu1) ...
==> default: Selecting previously unselected package libmirprotobuf0:amd64.
==> default: Preparing to unpack
.../libmirprotobuf0_0.1.8+14.04.20140411-0ubuntu1_amd64.deb ...
==> default: Unpacking libmirprotobuf0:amd64 (0.1.8+14.04.20140411-0ubuntu1) ...
==> default: Selecting previously unselected package
libmirclientplatform-mesa:amd64.
==> default: Preparing to unpack
.../libmirclientplatform-mesa_0.1.8+14.04.20140411-0ubuntu1_amd64.deb ...
==> default: Unpacking libmirclientplatform-mesa:amd64
(0.1.8+14.04.20140411-0ubuntu1) ...
==> default: Selecting previously unselected package libmirclient7:amd64.
==> default: Preparing to unpack
.../libmirclient7_0.1.8+14.04.20140411-0ubuntu1_amd64.deb ...
==> default: Unpacking libmirclient7:amd64 (0.1.8+14.04.20140411-0ubuntu1) ...
==> default: Selecting previously unselected package mysql-common.
==> default: Preparing to unpack
.../mysql-common_5.5.54-0ubuntu0.14.04.1_all.deb ...
==> default: Unpacking mysql-common (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package libmysqlclient18:amd64.
==> default: Preparing to unpack
.../libmysqlclient18_5.5.54-0ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking libmysqlclient18:amd64 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package libpaper1:amd64.
==> default: Preparing to unpack .../libpaper1_1.1.24+nmu2ubuntu3_amd64.deb ...
==> default: Unpacking libpaper1:amd64 (1.1.24+nmu2ubuntu3) ...
==> default: Selecting previously unselected package libpcrecpp0:amd64.
==> default: Preparing to unpack .../libpcrecpp0_1%3a8.31-2ubuntu2.3_amd64.deb
...
==> default: Unpacking libpcrecpp0:amd64 (1:8.31-2ubuntu2.3) ...
==> default: Selecting previously unselected package libpoppler44:amd64.
==> default: Preparing to unpack .../libpoppler44_0.24.5-2ubuntu4.4_amd64.deb
...
==> default: Unpacking libpoppler44:amd64 (0.24.5-2ubuntu4.4) ...
==> default: Selecting previously unselected package libpoppler-glib8:amd64.
==> default: Preparing to unpack
.../libpoppler-glib8_0.24.5-2ubuntu4.4_amd64.deb ...
==> default: Unpacking libpoppler-glib8:amd64 (0.24.5-2ubuntu4.4) ...
==> default: Selecting previously unselected package libexpat1-dev:amd64.
==> default: Preparing to unpack .../libexpat1-dev_2.1.0-4ubuntu1.3_amd64.deb
...
==> default: Unpacking libexpat1-dev:amd64 (2.1.0-4ubuntu1.3) ...
==> default: Selecting previously unselected package libpython2.7-dev:amd64.
==> default: Preparing to unpack
.../libpython2.7-dev_2.7.6-8ubuntu0.3_amd64.deb ...
==> default: Unpacking libpython2.7-dev:amd64 (2.7.6-8ubuntu0.3) ...
==> default: Selecting previously unselected package libsecret-common.
==> default: Preparing to unpack .../libsecret-common_0.16-0ubuntu1_all.deb ...
==> default: Unpacking libsecret-common (0.16-0ubuntu1) ...
==> default: Selecting previously unselected package libsecret-1-0:amd64.
==> default: Preparing to unpack .../libsecret-1-0_0.16-0ubuntu1_amd64.deb ...
==> default: Unpacking libsecret-1-0:amd64 (0.16-0ubuntu1) ...
==> default: Selecting previously unselected package libserf-1-1:amd64.
==> default: Preparing to unpack .../libserf-1-1_1.3.3-1ubuntu0.1_amd64.deb ...
==> default: Unpacking libserf-1-1:amd64 (1.3.3-1ubuntu0.1) ...
==> default: Selecting previously unselected package libsvn1:amd64.
==> default: Preparing to unpack .../libsvn1_1.8.8-1ubuntu3.2_amd64.deb ...
==> default: Unpacking libsvn1:amd64 (1.8.8-1ubuntu3.2) ...
==> default: Selecting previously unselected package libtcl8.6:amd64.
==> default: Preparing to unpack .../libtcl8.6_8.6.1-4ubuntu1_amd64.deb ...
==> default: Unpacking libtcl8.6:amd64 (8.6.1-4ubuntu1) ...
==> default: Selecting previously unselected package libxft2:amd64.
==> default: Preparing to unpack .../libxft2_2.3.1-2_amd64.deb ...
==> default: Unpacking libxft2:amd64 (2.3.1-2) ...
==> default: Selecting previously unselected package libxss1:amd64.
==> default: Preparing to unpack .../libxss1_1%3a1.2.2-1_amd64.deb ...
==> default: Unpacking libxss1:amd64 (1:1.2.2-1) ...
==> default: Selecting previously unselected package libtk8.6:amd64.
==> default: Preparing to unpack .../libtk8.6_8.6.1-3ubuntu2_amd64.deb ...
==> default: Unpacking libtk8.6:amd64 (8.6.1-3ubuntu2) ...
==> default: Selecting previously unselected package libudisks2-0:amd64.
==> default: Preparing to unpack .../libudisks2-0_2.1.3-1ubuntu0.1_amd64.deb ...
==> default: Unpacking libudisks2-0:amd64 (2.1.3-1ubuntu0.1) ...
==> default: Selecting previously unselected package libxcb-randr0:amd64.
==> default: Preparing to unpack .../libxcb-randr0_1.10-2ubuntu1_amd64.deb ...
==> default: Unpacking libxcb-randr0:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-shape0:amd64.
==> default: Preparing to unpack .../libxcb-shape0_1.10-2ubuntu1_amd64.deb ...
==> default: Unpacking libxcb-shape0:amd64 (1.10-2ubuntu1) ...
==> default: Preparing to unpack .../libxpm4_1%3a3.5.10-1ubuntu0.1_amd64.deb ...
==> default: Unpacking libxpm4:amd64 (1:3.5.10-1ubuntu0.1) over (1:3.5.10-1) ...
==> default: Selecting previously unselected package libxres1:amd64.
==> default: Preparing to unpack .../libxres1_2%3a1.0.7-1_amd64.deb ...
==> default: Unpacking libxres1:amd64 (2:1.0.7-1) ...
==> default: Selecting previously unselected package libxslt1.1:amd64.
==> default: Preparing to unpack .../libxslt1.1_1.1.28-2build1_amd64.deb ...
==> default: Unpacking libxslt1.1:amd64 (1.1.28-2build1) ...
==> default: Selecting previously unselected package libxv1:amd64.
==> default: Preparing to unpack .../libxv1_2%3a1.0.10-1_amd64.deb ...
==> default: Unpacking libxv1:amd64 (2:1.0.10-1) ...
==> default: Selecting previously unselected package libxvmc1:amd64.
==> default: Preparing to unpack .../libxvmc1_2%3a1.0.8-1ubuntu1_amd64.deb ...
==> default: Unpacking libxvmc1:amd64 (2:1.0.8-1ubuntu1) ...
==> default: Selecting previously unselected package libxxf86dga1:amd64.
==> default: Preparing to unpack .../libxxf86dga1_2%3a1.1.4-1_amd64.deb ...
==> default: Unpacking libxxf86dga1:amd64 (2:1.1.4-1) ...
==> default: Selecting previously unselected package tex-common.
==> default: Preparing to unpack .../tex-common_4.04_all.deb ...
==> default: Unpacking tex-common (4.04) ...
==> default: Selecting previously unselected package fonts-lmodern.
==> default: Preparing to unpack .../fonts-lmodern_2.004.4-3_all.deb ...
==> default: Unpacking fonts-lmodern (2.004.4-3) ...
==> default: Selecting previously unselected package lmodern.
==> default: Preparing to unpack .../lmodern_2.004.4-3_all.deb ...
==> default: Unpacking lmodern (2.004.4-3) ...
==> default: Selecting previously unselected package libdbi-perl.
==> default: Preparing to unpack .../libdbi-perl_1.630-1_amd64.deb ...
==> default: Unpacking libdbi-perl (1.630-1) ...
==> default: Selecting previously unselected package libdbd-mysql-perl.
==> default: Preparing to unpack
.../libdbd-mysql-perl_4.025-1ubuntu0.1_amd64.deb ...
==> default: Unpacking libdbd-mysql-perl (4.025-1ubuntu0.1) ...
==> default: Selecting previously unselected package libterm-readkey-perl.
==> default: Preparing to unpack .../libterm-readkey-perl_2.31-1_amd64.deb ...
==> default: Unpacking libterm-readkey-perl (2.31-1) ...
==> default: Selecting previously unselected package mysql-client-core-5.5.
==> default: Preparing to unpack
.../mysql-client-core-5.5_5.5.54-0ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking mysql-client-core-5.5 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package mysql-client-5.5.
==> default: Preparing to unpack
.../mysql-client-5.5_5.5.54-0ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking mysql-client-5.5 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package mysql-server-core-5.5.
==> default: Preparing to unpack
.../mysql-server-core-5.5_5.5.54-0ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking mysql-server-core-5.5 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Processing triggers for ca-certificates (20160104ubuntu0.14.04.1)
...
==> default: Updating certificates in /etc/ssl/certs...
==> default: 0 added, 0 removed; done.
==> default: Running hooks in /etc/ca-certificates/update.d....
==> default: done.
==> default: Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
==> default: Processing triggers for mime-support (3.54ubuntu1.1) ...
==> default: Processing triggers for hicolor-icon-theme (0.13-1) ...
==> default: Processing triggers for fontconfig (2.11.0-0ubuntu4.2) ...
==> default: Setting up mysql-common (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package mysql-server-5.5.
==> default: (Reading database ... 66622 files and directories currently
installed.)
==> default: Preparing to unpack
.../mysql-server-5.5_5.5.54-0ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking mysql-server-5.5 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package poppler-data.
==> default: Preparing to unpack .../poppler-data_0.4.6-4_all.deb ...
==> default: Unpacking poppler-data (0.4.6-4) ...
==> default: Selecting previously unselected package fonts-texgyre.
==> default: Preparing to unpack .../fonts-texgyre_2.004.2-4_all.deb ...
==> default: Unpacking fonts-texgyre (2.004.2-4) ...
==> default: Selecting previously unselected package tex-gyre.
==> default: Preparing to unpack .../tex-gyre_2.004.2-4_all.deb ...
==> default: Unpacking tex-gyre (2.004.2-4) ...
==> default: Selecting previously unselected package libc-ares2:amd64.
==> default: Preparing to unpack .../libc-ares2_1.10.0-2ubuntu0.1_amd64.deb ...
==> default: Unpacking libc-ares2:amd64 (1.10.0-2ubuntu0.1) ...
==> default: Selecting previously unselected package libglu1-mesa:amd64.
==> default: Preparing to unpack .../libglu1-mesa_9.0.0-2_amd64.deb ...
==> default: Unpacking libglu1-mesa:amd64 (9.0.0-2) ...
==> default: Selecting previously unselected package libgnutlsxx27:amd64.
==> default: Preparing to unpack
.../libgnutlsxx27_2.12.23-12ubuntu2.6_amd64.deb ...
==> default: Unpacking libgnutlsxx27:amd64 (2.12.23-12ubuntu2.6) ...
==> default: Selecting previously unselected package libwebp5:amd64.
==> default: Preparing to unpack .../libwebp5_0.4.0-4_amd64.deb ...
==> default: Unpacking libwebp5:amd64 (0.4.0-4) ...
==> default: Selecting previously unselected package libwebpmux1:amd64.
==> default: Preparing to unpack .../libwebpmux1_0.4.0-4_amd64.deb ...
==> default: Unpacking libwebpmux1:amd64 (0.4.0-4) ...
==> default: Selecting previously unselected package astyle.
==> default: Preparing to unpack .../astyle_2.03-1_amd64.deb ...
==> default: Unpacking astyle (2.03-1) ...
==> default: Selecting previously unselected package autotools-dev.
==> default: Preparing to unpack .../autotools-dev_20130810.1_all.deb ...
==> default: Unpacking autotools-dev (20130810.1) ...
==> default: Selecting previously unselected package libstdc++-4.8-dev:amd64.
==> default: Preparing to unpack
.../libstdc++-4.8-dev_4.8.4-2ubuntu1~14.04.3_amd64.deb ...
==> default: Unpacking libstdc++-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Selecting previously unselected package g++-4.8.
==> default: Preparing to unpack .../g++-4.8_4.8.4-2ubuntu1~14.04.3_amd64.deb
...
==> default: Unpacking g++-4.8 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Selecting previously unselected package g++.
==> default: Preparing to unpack .../g++_4%3a4.8.2-1ubuntu6_amd64.deb ...
==> default: Unpacking g++ (4:4.8.2-1ubuntu6) ...
==> default: Selecting previously unselected package libdpkg-perl.
==> default: Preparing to unpack .../libdpkg-perl_1.17.5ubuntu5.7_all.deb ...
==> default: Unpacking libdpkg-perl (1.17.5ubuntu5.7) ...
==> default: Selecting previously unselected package dpkg-dev.
==> default: Preparing to unpack .../dpkg-dev_1.17.5ubuntu5.7_all.deb ...
==> default: Unpacking dpkg-dev (1.17.5ubuntu5.7) ...
==> default: Selecting previously unselected package build-essential.
==> default: Preparing to unpack .../build-essential_11.6ubuntu6_amd64.deb ...
==> default: Unpacking build-essential (11.6ubuntu6) ...
==> default: Selecting previously unselected package openjdk-7-jdk:amd64.
==> default: Preparing to unpack
.../openjdk-7-jdk_7u121-2.6.8-1ubuntu0.14.04.3_amd64.deb ...
==> default: Unpacking openjdk-7-jdk:amd64 (7u121-2.6.8-1ubuntu0.14.04.3) ...
==> default: Selecting previously unselected package default-jdk.
==> default: Preparing to unpack .../default-jdk_2%3a1.7-51_amd64.deb ...
==> default: Unpacking default-jdk (2:1.7-51) ...
==> default: Selecting previously unselected package desktop-file-utils.
==> default: Preparing to unpack .../desktop-file-utils_0.22-1ubuntu1_amd64.deb
...
==> default: Unpacking desktop-file-utils (0.22-1ubuntu1) ...
==> default: Selecting previously unselected package dictionaries-common.
==> default: Preparing to unpack .../dictionaries-common_1.20.5_all.deb ...
==> default: Adding 'diversion of /usr/share/dict/words to
/usr/share/dict/words.pre-dictionaries-common by dictionaries-common'
==> default: Unpacking dictionaries-common (1.20.5) ...
==> default: Selecting previously unselected package doxygen.
==> default: Preparing to unpack .../doxygen_1.8.6-2_amd64.deb ...
==> default: Unpacking doxygen (1.8.6-2) ...
==> default: Selecting previously unselected package exuberant-ctags.
==> default: Preparing to unpack
.../exuberant-ctags_1%3a5.9~svn20110310-7ubuntu0.1_amd64.deb ...
==> default: Unpacking exuberant-ctags (1:5.9~svn20110310-7ubuntu0.1) ...
==> default: Selecting previously unselected package fonts-dejavu-extra.
==> default: Preparing to unpack .../fonts-dejavu-extra_2.34-1ubuntu1_all.deb
...
==> default: Unpacking fonts-dejavu-extra (2.34-1ubuntu1) ...
==> default: Selecting previously unselected package fonts-liberation.
==> default: Preparing to unpack .../fonts-liberation_1.07.3-3_all.deb ...
==> default: Unpacking fonts-liberation (1.07.3-3) ...
==> default: Selecting previously unselected package fonts-lyx.
==> default: Preparing to unpack .../fonts-lyx_2.0.8.1-0ubuntu1_all.deb ...
==> default: Unpacking fonts-lyx (2.0.8.1-0ubuntu1) ...
==> default: Selecting previously unselected package libgfortran-4.8-dev:amd64.
==> default: Preparing to unpack
.../libgfortran-4.8-dev_4.8.4-2ubuntu1~14.04.3_amd64.deb ...
==> default: Unpacking libgfortran-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Selecting previously unselected package gfortran-4.8.
==> default: Preparing to unpack
.../gfortran-4.8_4.8.4-2ubuntu1~14.04.3_amd64.deb ...
==> default: Unpacking gfortran-4.8 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Selecting previously unselected package gfortran.
==> default: Preparing to unpack .../gfortran_4%3a4.8.2-1ubuntu6_amd64.deb ...
==> default: Unpacking gfortran (4:4.8.2-1ubuntu6) ...
==> default: Selecting previously unselected package libijs-0.35.
==> default: Preparing to unpack .../libijs-0.35_0.35-8build1_amd64.deb ...
==> default: Unpacking libijs-0.35 (0.35-8build1) ...
==> default: Selecting previously unselected package libjbig2dec0.
==> default: Preparing to unpack
.../libjbig2dec0_0.11+20120125-1ubuntu1_amd64.deb ...
==> default: Unpacking libjbig2dec0 (0.11+20120125-1ubuntu1) ...
==> default: Selecting previously unselected package libgs9-common.
==> default: Preparing to unpack
.../libgs9-common_9.10~dfsg-0ubuntu10.6_all.deb ...
==> default: Unpacking libgs9-common (9.10~dfsg-0ubuntu10.6) ...
==> default: Selecting previously unselected package libgs9.
==> default: Preparing to unpack .../libgs9_9.10~dfsg-0ubuntu10.6_amd64.deb ...
==> default: Unpacking libgs9 (9.10~dfsg-0ubuntu10.6) ...
==> default: Selecting previously unselected package gsfonts.
==> default: Preparing to unpack
.../gsfonts_1%3a8.11+urwcyr1.0.7~pre44-4.2ubuntu1_all.deb ...
==> default: Unpacking gsfonts (1:8.11+urwcyr1.0.7~pre44-4.2ubuntu1) ...
==> default: Selecting previously unselected package ghostscript.
==> default: Preparing to unpack
.../ghostscript_9.10~dfsg-0ubuntu10.6_amd64.deb ...
==> default: Unpacking ghostscript (9.10~dfsg-0ubuntu10.6) ...
==> default: Selecting previously unselected package gir1.2-freedesktop.
==> default: Preparing to unpack
.../gir1.2-freedesktop_1.40.0-1ubuntu0.2_amd64.deb ...
==> default: Unpacking gir1.2-freedesktop (1.40.0-1ubuntu0.2) ...
==> default: Selecting previously unselected package gir1.2-poppler-0.18.
==> default: Preparing to unpack
.../gir1.2-poppler-0.18_0.24.5-2ubuntu4.4_amd64.deb ...
==> default: Unpacking gir1.2-poppler-0.18 (0.24.5-2ubuntu4.4) ...
==> default: Selecting previously unselected package liberror-perl.
==> default: Preparing to unpack .../liberror-perl_0.17-1.1_all.deb ...
==> default: Unpacking liberror-perl (0.17-1.1) ...
==> default: Selecting previously unselected package git-man.
==> default: Preparing to unpack .../git-man_1%3a1.9.1-1ubuntu0.3_all.deb ...
==> default: Unpacking git-man (1:1.9.1-1ubuntu0.3) ...
==> default: Selecting previously unselected package git.
==> default: Preparing to unpack .../git_1%3a1.9.1-1ubuntu0.3_amd64.deb ...
==> default: Unpacking git (1:1.9.1-1ubuntu0.3) ...
==> default: Selecting previously unselected package libcdt5.
==> default: Preparing to unpack .../libcdt5_2.36.0-0ubuntu3.1_amd64.deb ...
==> default: Unpacking libcdt5 (2.36.0-0ubuntu3.1) ...
==> default: Selecting previously unselected package libcgraph6.
==> default: Preparing to unpack .../libcgraph6_2.36.0-0ubuntu3.1_amd64.deb ...
==> default: Unpacking libcgraph6 (2.36.0-0ubuntu3.1) ...
==> default: Selecting previously unselected package libpathplan4.
==> default: Preparing to unpack .../libpathplan4_2.36.0-0ubuntu3.1_amd64.deb
...
==> default: Unpacking libpathplan4 (2.36.0-0ubuntu3.1) ...
==> default: Selecting previously unselected package libgvc6.
==> default: Preparing to unpack .../libgvc6_2.36.0-0ubuntu3.1_amd64.deb ...
==> default: Unpacking libgvc6 (2.36.0-0ubuntu3.1) ...
==> default: Selecting previously unselected package libgvpr2.
==> default: Preparing to unpack .../libgvpr2_2.36.0-0ubuntu3.1_amd64.deb ...
==> default: Unpacking libgvpr2 (2.36.0-0ubuntu3.1) ...
==> default: Selecting previously unselected package graphviz.
==> default: Preparing to unpack .../graphviz_2.36.0-0ubuntu3.1_amd64.deb ...
==> default: Unpacking graphviz (2.36.0-0ubuntu3.1) ...
==> default: Selecting previously unselected package x11-utils.
==> default: Preparing to unpack .../x11-utils_7.7+1_amd64.deb ...
==> default: Unpacking x11-utils (7.7+1) ...
==> default: Selecting previously unselected package udisks2.
==> default: Preparing to unpack .../udisks2_2.1.3-1ubuntu0.1_amd64.deb ...
==> default: Unpacking udisks2 (2.1.3-1ubuntu0.1) ...
==> default: Selecting previously unselected package gvfs-common.
==> default: Preparing to unpack .../gvfs-common_1.20.3-0ubuntu1.2_all.deb ...
==> default: Unpacking gvfs-common (1.20.3-0ubuntu1.2) ...
==> default: Selecting previously unselected package gvfs-libs:amd64.
==> default: Preparing to unpack .../gvfs-libs_1.20.3-0ubuntu1.2_amd64.deb ...
==> default: Unpacking gvfs-libs:amd64 (1.20.3-0ubuntu1.2) ...
==> default: Selecting previously unselected package gvfs-daemons.
==> default: Preparing to unpack .../gvfs-daemons_1.20.3-0ubuntu1.2_amd64.deb
...
==> default: Unpacking gvfs-daemons (1.20.3-0ubuntu1.2) ...
==> default: Selecting previously unselected package gvfs:amd64.
==> default: Preparing to unpack .../gvfs_1.20.3-0ubuntu1.2_amd64.deb ...
==> default: Unpacking gvfs:amd64 (1.20.3-0ubuntu1.2) ...
==> default: Selecting previously unselected package hunspell-en-us.
==> default: Preparing to unpack .../hunspell-en-us_20070829-4ubuntu3_all.deb
...
==> default: Unpacking hunspell-en-us (20070829-4ubuntu3) ...
==> default: Selecting previously unselected package comerr-dev.
==> default: Preparing to unpack .../comerr-dev_2.1-1.42.9-3ubuntu1.3_amd64.deb
...
==> default: Unpacking comerr-dev (2.1-1.42.9-3ubuntu1.3) ...
==> default: Selecting previously unselected package krb5-multidev.
==> default: Preparing to unpack
.../krb5-multidev_1.12+dfsg-2ubuntu5.3_amd64.deb ...
==> default: Unpacking krb5-multidev (1.12+dfsg-2ubuntu5.3) ...
==> default: Selecting previously unselected package libkpathsea6.
==> default: Preparing to unpack
.../libkpathsea6_2013.20130729.30972-2build3_amd64.deb ...
==> default: Unpacking libkpathsea6 (2013.20130729.30972-2build3) ...
==> default: Selecting previously unselected package libptexenc1.
==> default: Preparing to unpack
.../libptexenc1_2013.20130729.30972-2build3_amd64.deb ...
==> default: Unpacking libptexenc1 (2013.20130729.30972-2build3) ...
==> default: Selecting previously unselected package texlive-binaries.
==> default: Preparing to unpack
.../texlive-binaries_2013.20130729.30972-2build3_amd64.deb ...
==> default: Unpacking texlive-binaries (2013.20130729.30972-2build3) ...
==> default: Selecting previously unselected package xdg-utils.
==> default: Preparing to unpack .../xdg-utils_1.1.0~rc1-2ubuntu7.1_all.deb ...
==> default: Unpacking xdg-utils (1.1.0~rc1-2ubuntu7.1) ...
==> default: Selecting previously unselected package luatex.
==> default: Preparing to unpack .../luatex_0.76.0-3ubuntu1_amd64.deb ...
==> default: Unpacking luatex (0.76.0-3ubuntu1) ...
==> default: Selecting previously unselected package libpaper-utils.
==> default: Preparing to unpack
.../libpaper-utils_1.1.24+nmu2ubuntu3_amd64.deb ...
==> default: Unpacking libpaper-utils (1.1.24+nmu2ubuntu3) ...
==> default: Selecting previously unselected package texlive-base.
==> default: Preparing to unpack .../texlive-base_2013.20140215-1_all.deb ...
==> default: Unpacking texlive-base (2013.20140215-1) ...
==> default: Selecting previously unselected package texlive-latex-base.
==> default: Preparing to unpack .../texlive-latex-base_2013.20140215-1_all.deb
...
==> default: Unpacking texlive-latex-base (2013.20140215-1) ...
==> default: Selecting previously unselected package texlive-latex-recommended.
==> default: Preparing to unpack
.../texlive-latex-recommended_2013.20140215-1_all.deb ...
==> default: Unpacking texlive-latex-recommended (2013.20140215-1) ...
==> default: Selecting previously unselected package latex-xcolor.
==> default: Preparing to unpack .../latex-xcolor_2.11-1.1_all.deb ...
==> default: Unpacking latex-xcolor (2.11-1.1) ...
==> default: Selecting previously unselected package pgf.
==> default: Preparing to unpack .../archives/pgf_2.10-1_all.deb ...
==> default: Unpacking pgf (2.10-1) ...
==> default: Selecting previously unselected package latex-beamer.
==> default: Preparing to unpack .../latex-beamer_3.24-1_all.deb ...
==> default: Unpacking latex-beamer (3.24-1) ...
==> default: Selecting previously unselected package libalgorithm-diff-perl.
==> default: Preparing to unpack .../libalgorithm-diff-perl_1.19.02-3_all.deb
...
==> default: Unpacking libalgorithm-diff-perl (1.19.02-3) ...
==> default: Selecting previously unselected package libalgorithm-diff-xs-perl.
==> default: Preparing to unpack
.../libalgorithm-diff-xs-perl_0.04-2build4_amd64.deb ...
==> default: Unpacking libalgorithm-diff-xs-perl (0.04-2build4) ...
==> default: Selecting previously unselected package libalgorithm-merge-perl.
==> default: Preparing to unpack .../libalgorithm-merge-perl_0.08-2_all.deb ...
==> default: Unpacking libalgorithm-merge-perl (0.08-2) ...
==> default: Selecting previously unselected package libblas3.
==> default: Preparing to unpack .../libblas3_1.2.20110419-7_amd64.deb ...
==> default: Unpacking libblas3 (1.2.20110419-7) ...
==> default: Selecting previously unselected package zlib1g-dev:amd64.
==> default: Preparing to unpack
.../zlib1g-dev_1%3a1.2.8.dfsg-1ubuntu1_amd64.deb ...
==> default: Unpacking zlib1g-dev:amd64 (1:1.2.8.dfsg-1ubuntu1) ...
==> default: Selecting previously unselected package libpng12-dev.
==> default: Preparing to unpack
.../libpng12-dev_1.2.50-1ubuntu2.14.04.2_amd64.deb ...
==> default: Unpacking libpng12-dev (1.2.50-1ubuntu2.14.04.2) ...
==> default: Selecting previously unselected package libfreetype6-dev.
==> default: Preparing to unpack
.../libfreetype6-dev_2.5.2-1ubuntu2.5_amd64.deb ...
==> default: Unpacking libfreetype6-dev (2.5.2-1ubuntu2.5) ...
==> default: Selecting previously unselected package pkg-config.
==> default: Preparing to unpack .../pkg-config_0.26-1ubuntu4_amd64.deb ...
==> default: Unpacking pkg-config (0.26-1ubuntu4) ...
==> default: Selecting previously unselected package libfontconfig1-dev.
==> default: Preparing to unpack
.../libfontconfig1-dev_2.11.0-0ubuntu4.2_amd64.deb ...
==> default: Unpacking libfontconfig1-dev (2.11.0-0ubuntu4.2) ...
==> default: Selecting previously unselected package xorg-sgml-doctools.
==> default: Preparing to unpack .../xorg-sgml-doctools_1%3a1.11-1_all.deb ...
==> default: Unpacking xorg-sgml-doctools (1:1.11-1) ...
==> default: Selecting previously unselected package x11proto-core-dev.
==> default: Preparing to unpack .../x11proto-core-dev_7.0.26-1~ubuntu2_all.deb
...
==> default: Unpacking x11proto-core-dev (7.0.26-1~ubuntu2) ...
==> default: Selecting previously unselected package libxau-dev:amd64.
==> default: Preparing to unpack .../libxau-dev_1%3a1.0.8-1_amd64.deb ...
==> default: Unpacking libxau-dev:amd64 (1:1.0.8-1) ...
==> default: Selecting previously unselected package libxdmcp-dev:amd64.
==> default: Preparing to unpack .../libxdmcp-dev_1%3a1.1.1-1_amd64.deb ...
==> default: Unpacking libxdmcp-dev:amd64 (1:1.1.1-1) ...
==> default: Selecting previously unselected package x11proto-input-dev.
==> default: Preparing to unpack .../x11proto-input-dev_2.3-1_all.deb ...
==> default: Unpacking x11proto-input-dev (2.3-1) ...
==> default: Selecting previously unselected package x11proto-kb-dev.
==> default: Preparing to unpack .../x11proto-kb-dev_1.0.6-2_all.deb ...
==> default: Unpacking x11proto-kb-dev (1.0.6-2) ...
==> default: Selecting previously unselected package xtrans-dev.
==> default: Preparing to unpack .../xtrans-dev_1.3.5-1~ubuntu14.04.1_all.deb
...
==> default: Unpacking xtrans-dev (1.3.5-1~ubuntu14.04.1) ...
==> default: Selecting previously unselected package
libpthread-stubs0-dev:amd64.
==> default: Preparing to unpack .../libpthread-stubs0-dev_0.3-4_amd64.deb ...
==> default: Unpacking libpthread-stubs0-dev:amd64 (0.3-4) ...
==> default: Selecting previously unselected package libxcb1-dev:amd64.
==> default: Preparing to unpack .../libxcb1-dev_1.10-2ubuntu1_amd64.deb ...
==> default: Unpacking libxcb1-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libx11-dev:amd64.
==> default: Preparing to unpack .../libx11-dev_2%3a1.6.2-1ubuntu2_amd64.deb ...
==> default: Unpacking libx11-dev:amd64 (2:1.6.2-1ubuntu2) ...
==> default: Selecting previously unselected package x11proto-render-dev.
==> default: Preparing to unpack .../x11proto-render-dev_2%3a0.11.1-2_all.deb
...
==> default: Unpacking x11proto-render-dev (2:0.11.1-2) ...
==> default: Selecting previously unselected package libxrender-dev:amd64.
==> default: Preparing to unpack
.../libxrender-dev_1%3a0.9.8-1build0.14.04.1_amd64.deb ...
==> default: Unpacking libxrender-dev:amd64 (1:0.9.8-1build0.14.04.1) ...
==> default: Selecting previously unselected package libice-dev:amd64.
==> default: Preparing to unpack .../libice-dev_2%3a1.0.8-2_amd64.deb ...
==> default: Unpacking libice-dev:amd64 (2:1.0.8-2) ...
==> default: Selecting previously unselected package libsm-dev:amd64.
==> default: Preparing to unpack .../libsm-dev_2%3a1.2.1-2_amd64.deb ...
==> default: Unpacking libsm-dev:amd64 (2:1.2.1-2) ...
==> default: Selecting previously unselected package libpixman-1-dev.
==> default: Preparing to unpack
.../libpixman-1-dev_0.30.2-2ubuntu1.1_amd64.deb ...
==> default: Unpacking libpixman-1-dev (0.30.2-2ubuntu1.1) ...
==> default: Selecting previously unselected package libxcb-render0-dev:amd64.
==> default: Preparing to unpack .../libxcb-render0-dev_1.10-2ubuntu1_amd64.deb
...
==> default: Unpacking libxcb-render0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-shm0-dev:amd64.
==> default: Preparing to unpack .../libxcb-shm0-dev_1.10-2ubuntu1_amd64.deb ...
==> default: Unpacking libxcb-shm0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package x11proto-xext-dev.
==> default: Preparing to unpack .../x11proto-xext-dev_7.3.0-1_all.deb ...
==> default: Unpacking x11proto-xext-dev (7.3.0-1) ...
==> default: Selecting previously unselected package libxext-dev:amd64.
==> default: Preparing to unpack
.../libxext-dev_2%3a1.3.2-1ubuntu0.0.14.04.1_amd64.deb ...
==> default: Unpacking libxext-dev:amd64 (2:1.3.2-1ubuntu0.0.14.04.1) ...
==> default: Selecting previously unselected package libglib2.0-bin.
==> default: Preparing to unpack .../libglib2.0-bin_2.40.2-0ubuntu1_amd64.deb
...
==> default: Unpacking libglib2.0-bin (2.40.2-0ubuntu1) ...
==> default: Selecting previously unselected package libpcre3-dev:amd64.
==> default: Preparing to unpack .../libpcre3-dev_1%3a8.31-2ubuntu2.3_amd64.deb
...
==> default: Unpacking libpcre3-dev:amd64 (1:8.31-2ubuntu2.3) ...
==> default: Selecting previously unselected package libglib2.0-dev.
==> default: Preparing to unpack .../libglib2.0-dev_2.40.2-0ubuntu1_amd64.deb
...
==> default: Unpacking libglib2.0-dev (2.40.2-0ubuntu1) ...
==> default: Selecting previously unselected package libcairo2-dev.
==> default: Preparing to unpack
.../libcairo2-dev_1.13.0~20140204-0ubuntu1.1_amd64.deb ...
==> default: Unpacking libcairo2-dev (1.13.0~20140204-0ubuntu1.1) ...
==> default: Selecting previously unselected package libidn11-dev.
==> default: Preparing to unpack .../libidn11-dev_1.28-1ubuntu2.1_amd64.deb ...
==> default: Unpacking libidn11-dev (1.28-1ubuntu2.1) ...
==> default: Selecting previously unselected package libkrb5-dev.
==> default: Preparing to unpack .../libkrb5-dev_1.12+dfsg-2ubuntu5.3_amd64.deb
...
==> default: Unpacking libkrb5-dev (1.12+dfsg-2ubuntu5.3) ...
==> default: Selecting previously unselected package libldap2-dev:amd64.
==> default: Preparing to unpack
.../libldap2-dev_2.4.31-1+nmu2ubuntu8.3_amd64.deb ...
==> default: Unpacking libldap2-dev:amd64 (2.4.31-1+nmu2ubuntu8.3) ...
==> default: Selecting previously unselected package libgpg-error-dev.
==> default: Preparing to unpack .../libgpg-error-dev_1.12-0.2ubuntu1_amd64.deb
...
==> default: Unpacking libgpg-error-dev (1.12-0.2ubuntu1) ...
==> default: Selecting previously unselected package libgcrypt11-dev.
==> default: Preparing to unpack .../libgcrypt11-dev_1.5.3-2ubuntu4.4_amd64.deb
...
==> default: Unpacking libgcrypt11-dev (1.5.3-2ubuntu4.4) ...
==> default: Selecting previously unselected package libtasn1-6-dev.
==> default: Preparing to unpack .../libtasn1-6-dev_3.4-3ubuntu0.4_amd64.deb ...
==> default: Unpacking libtasn1-6-dev (3.4-3ubuntu0.4) ...
==> default: Selecting previously unselected package libp11-kit-dev.
==> default: Preparing to unpack .../libp11-kit-dev_0.20.2-2ubuntu2_amd64.deb
...
==> default: Unpacking libp11-kit-dev (0.20.2-2ubuntu2) ...
==> default: Selecting previously unselected package libgnutls-dev.
==> default: Preparing to unpack
.../libgnutls-dev_2.12.23-12ubuntu2.6_amd64.deb ...
==> default: Unpacking libgnutls-dev (2.12.23-12ubuntu2.6) ...
==> default: Selecting previously unselected package librtmp-dev.
==> default: Preparing to unpack
.../librtmp-dev_2.4+20121230.gitdf6c518-1_amd64.deb ...
==> default: Unpacking librtmp-dev (2.4+20121230.gitdf6c518-1) ...
==> default: Selecting previously unselected package libssl-dev:amd64.
==> default: Preparing to unpack .../libssl-dev_1.0.1f-1ubuntu2.22_amd64.deb ...
==> default: Unpacking libssl-dev:amd64 (1.0.1f-1ubuntu2.22) ...
==> default: Selecting previously unselected package libcurl4-openssl-dev:amd64.
==> default: Preparing to unpack
.../libcurl4-openssl-dev_7.35.0-1ubuntu2.10_amd64.deb ...
==> default: Unpacking libcurl4-openssl-dev:amd64 (7.35.0-1ubuntu2.10) ...
==> default: Selecting previously unselected package x11proto-dmx-dev.
==> default: Preparing to unpack .../x11proto-dmx-dev_1%3a2.3.1-2_all.deb ...
==> default: Unpacking x11proto-dmx-dev (1:2.3.1-2) ...
==> default: Selecting previously unselected package libdmx-dev:amd64.
==> default: Preparing to unpack .../libdmx-dev_1%3a1.1.3-1_amd64.deb ...
==> default: Unpacking libdmx-dev:amd64 (1:1.1.3-1) ...
==> default: Selecting previously unselected package libdrm-dev:amd64.
==> default: Preparing to unpack
.../libdrm-dev_2.4.67-1ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking libdrm-dev:amd64 (2.4.67-1ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package x11proto-dri2-dev.
==> default: Preparing to unpack .../x11proto-dri2-dev_2.8-2_all.deb ...
==> default: Unpacking x11proto-dri2-dev (2.8-2) ...
==> default: Selecting previously unselected package x11proto-gl-dev.
==> default: Preparing to unpack .../x11proto-gl-dev_1.4.17-1_all.deb ...
==> default: Unpacking x11proto-gl-dev (1.4.17-1) ...
==> default: Selecting previously unselected package x11proto-xf86vidmode-dev.
==> default: Preparing to unpack .../x11proto-xf86vidmode-dev_2.3.1-2_all.deb
...
==> default: Unpacking x11proto-xf86vidmode-dev (2.3.1-2) ...
==> default: Selecting previously unselected package libxxf86vm-dev:amd64.
==> default: Preparing to unpack .../libxxf86vm-dev_1%3a1.1.3-1_amd64.deb ...
==> default: Unpacking libxxf86vm-dev:amd64 (1:1.1.3-1) ...
==> default: Selecting previously unselected package x11proto-fixes-dev.
==> default: Preparing to unpack
.../x11proto-fixes-dev_1%3a5.0-2ubuntu2_all.deb ...
==> default: Unpacking x11proto-fixes-dev (1:5.0-2ubuntu2) ...
==> default: Selecting previously unselected package libxfixes-dev:amd64.
==> default: Preparing to unpack
.../libxfixes-dev_1%3a5.0.1-1ubuntu1.1_amd64.deb ...
==> default: Unpacking libxfixes-dev:amd64 (1:5.0.1-1ubuntu1.1) ...
==> default: Selecting previously unselected package x11proto-damage-dev.
==> default: Preparing to unpack .../x11proto-damage-dev_1%3a1.2.1-2_all.deb ...
==> default: Unpacking x11proto-damage-dev (1:1.2.1-2) ...
==> default: Selecting previously unselected package libxdamage-dev:amd64.
==> default: Preparing to unpack
.../libxdamage-dev_1%3a1.1.4-1ubuntu1_amd64.deb ...
==> default: Unpacking libxdamage-dev:amd64 (1:1.1.4-1ubuntu1) ...
==> default: Selecting previously unselected package libxcb-glx0-dev:amd64.
==> default: Preparing to unpack .../libxcb-glx0-dev_1.10-2ubuntu1_amd64.deb ...
==> default: Unpacking libxcb-glx0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-dri2-0-dev:amd64.
==> default: Preparing to unpack .../libxcb-dri2-0-dev_1.10-2ubuntu1_amd64.deb
...
==> default: Unpacking libxcb-dri2-0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-dri3-dev:amd64.
==> default: Preparing to unpack .../libxcb-dri3-dev_1.10-2ubuntu1_amd64.deb ...
==> default: Unpacking libxcb-dri3-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-randr0-dev:amd64.
==> default: Preparing to unpack .../libxcb-randr0-dev_1.10-2ubuntu1_amd64.deb
...
==> default: Unpacking libxcb-randr0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-shape0-dev:amd64.
==> default: Preparing to unpack .../libxcb-shape0-dev_1.10-2ubuntu1_amd64.deb
...
==> default: Unpacking libxcb-shape0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-xfixes0-dev:amd64.
==> default: Preparing to unpack .../libxcb-xfixes0-dev_1.10-2ubuntu1_amd64.deb
...
==> default: Unpacking libxcb-xfixes0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-sync-dev:amd64.
==> default: Preparing to unpack .../libxcb-sync-dev_1.10-2ubuntu1_amd64.deb ...
==> default: Unpacking libxcb-sync-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxcb-present-dev:amd64.
==> default: Preparing to unpack .../libxcb-present-dev_1.10-2ubuntu1_amd64.deb
...
==> default: Unpacking libxcb-present-dev:amd64 (1.10-2ubuntu1) ...
==> default: Selecting previously unselected package libxshmfence-dev:amd64.
==> default: Preparing to unpack .../libxshmfence-dev_1.1-2_amd64.deb ...
==> default: Unpacking libxshmfence-dev:amd64 (1.1-2) ...
==> default: Selecting previously unselected package libx11-xcb-dev:amd64.
==> default: Preparing to unpack
.../libx11-xcb-dev_2%3a1.6.2-1ubuntu2_amd64.deb ...
==> default: Unpacking libx11-xcb-dev:amd64 (2:1.6.2-1ubuntu2) ...
==> default: Selecting previously unselected package libprotobuf-lite8:amd64.
==> default: Preparing to unpack .../libprotobuf-lite8_2.5.0-9ubuntu1_amd64.deb
...
==> default: Unpacking libprotobuf-lite8:amd64 (2.5.0-9ubuntu1) ...
==> default: Selecting previously unselected package libprotobuf-dev:amd64.
==> default: Preparing to unpack .../libprotobuf-dev_2.5.0-9ubuntu1_amd64.deb
...
==> default: Unpacking libprotobuf-dev:amd64 (2.5.0-9ubuntu1) ...
==> default: Selecting previously unselected package libmirprotobuf-dev:amd64.
==> default: Preparing to unpack
.../libmirprotobuf-dev_0.1.8+14.04.20140411-0ubuntu1_amd64.deb ...
==> default: Unpacking libmirprotobuf-dev:amd64 (0.1.8+14.04.20140411-0ubuntu1)
...
==> default: Selecting previously unselected package mircommon-dev:amd64.
==> default: Preparing to unpack
.../mircommon-dev_0.1.8+14.04.20140411-0ubuntu1_amd64.deb ...
==> default: Unpacking mircommon-dev:amd64 (0.1.8+14.04.20140411-0ubuntu1) ...
==> default: Selecting previously unselected package libmirclient-dev:amd64.
==> default: Preparing to unpack
.../libmirclient-dev_0.1.8+14.04.20140411-0ubuntu1_amd64.deb ...
==> default: Unpacking libmirclient-dev:amd64 (0.1.8+14.04.20140411-0ubuntu1)
...
==> default: Selecting previously unselected package libwayland-dev.
==> default: Preparing to unpack .../libwayland-dev_1.4.0-1ubuntu1_amd64.deb ...
==> default: Unpacking libwayland-dev (1.4.0-1ubuntu1) ...
==> default: Selecting previously unselected package libegl1-mesa-dev.
==> default: Preparing to unpack
.../libegl1-mesa-dev_10.1.3-0ubuntu0.6_amd64.deb ...
==> default: Unpacking libegl1-mesa-dev (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package libfile-basedir-perl.
==> default: Preparing to unpack
.../libfile-basedir-perl_0.03-1fakesync1_all.deb ...
==> default: Unpacking libfile-basedir-perl (0.03-1fakesync1) ...
==> default: Selecting previously unselected package libfile-desktopentry-perl.
==> default: Preparing to unpack .../libfile-desktopentry-perl_0.07-1_all.deb
...
==> default: Unpacking libfile-desktopentry-perl (0.07-1) ...
==> default: Selecting previously unselected package libfile-fcntllock-perl.
==> default: Preparing to unpack
.../libfile-fcntllock-perl_0.14-2build1_amd64.deb ...
==> default: Unpacking libfile-fcntllock-perl (0.14-2build1) ...
==> default: Selecting previously unselected package libfile-mimeinfo-perl.
==> default: Preparing to unpack .../libfile-mimeinfo-perl_0.22-1_all.deb ...
==> default: Unpacking libfile-mimeinfo-perl (0.22-1) ...
==> default: Selecting previously unselected package libfontenc-dev:amd64.
==> default: Preparing to unpack .../libfontenc-dev_1%3a1.1.2-1_amd64.deb ...
==> default: Unpacking libfontenc-dev:amd64 (1:1.1.2-1) ...
==> default: Selecting previously unselected package x11proto-fonts-dev.
==> default: Preparing to unpack .../x11proto-fonts-dev_2.1.3-1~ubuntu2_all.deb
...
==> default: Unpacking x11proto-fonts-dev (2.1.3-1~ubuntu2) ...
==> default: Selecting previously unselected package libfs-dev:amd64.
==> default: Preparing to unpack .../libfs-dev_2%3a1.0.5-1_amd64.deb ...
==> default: Unpacking libfs-dev:amd64 (2:1.0.5-1) ...
==> default: Selecting previously unselected package libgconf2-4:amd64.
==> default: Preparing to unpack .../libgconf2-4_3.2.6-0ubuntu2_amd64.deb ...
==> default: Unpacking libgconf2-4:amd64 (3.2.6-0ubuntu2) ...
==> default: Selecting previously unselected package libgles2-mesa-dev.
==> default: Preparing to unpack
.../libgles2-mesa-dev_10.1.3-0ubuntu0.6_amd64.deb ...
==> default: Unpacking libgles2-mesa-dev (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package mesa-common-dev.
==> default: Preparing to unpack
.../mesa-common-dev_10.1.3-0ubuntu0.6_amd64.deb ...
==> default: Unpacking mesa-common-dev (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package libgl1-mesa-dev.
==> default: Preparing to unpack
.../libgl1-mesa-dev_10.1.3-0ubuntu0.6_amd64.deb ...
==> default: Unpacking libgl1-mesa-dev (10.1.3-0ubuntu0.6) ...
==> default: Selecting previously unselected package libglu1-mesa-dev.
==> default: Preparing to unpack .../libglu1-mesa-dev_9.0.0-2_amd64.deb ...
==> default: Unpacking libglu1-mesa-dev (9.0.0-2) ...
==> default: Selecting previously unselected package libxdot4.
==> default: Preparing to unpack .../libxdot4_2.36.0-0ubuntu3.1_amd64.deb ...
==> default: Unpacking libxdot4 (2.36.0-0ubuntu3.1) ...
==> default: Selecting previously unselected package libltdl-dev:amd64.
==> default: Preparing to unpack .../libltdl-dev_2.4.2-1.7ubuntu1_amd64.deb ...
==> default: Unpacking libltdl-dev:amd64 (2.4.2-1.7ubuntu1) ...
==> default: Selecting previously unselected package libgraphviz-dev.
==> default: Preparing to unpack
.../libgraphviz-dev_2.36.0-0ubuntu3.1_amd64.deb ...
==> default: Unpacking libgraphviz-dev (2.36.0-0ubuntu3.1) ...
==> default: Selecting previously unselected package libgtk2.0-bin.
==> default: Preparing to unpack .../libgtk2.0-bin_2.24.23-0ubuntu1.4_amd64.deb
...
==> default: Unpacking libgtk2.0-bin (2.24.23-0ubuntu1.4) ...
==> default: Selecting previously unselected package libhtml-template-perl.
==> default: Preparing to unpack .../libhtml-template-perl_2.95-1_all.deb ...
==> default: Unpacking libhtml-template-perl (2.95-1) ...
==> default: Selecting previously unselected package libhunspell-dev:amd64.
==> default: Preparing to unpack .../libhunspell-dev_1.3.2-6ubuntu2.1_amd64.deb
...
==> default: Unpacking libhunspell-dev:amd64 (1.3.2-6ubuntu2.1) ...
==> default: Selecting previously unselected package liblapack3.
==> default: Preparing to unpack .../liblapack3_3.5.0-2ubuntu1_amd64.deb ...
==> default: Unpacking liblapack3 (3.5.0-2ubuntu1) ...
==> default: Selecting previously unselected package libmysqlclient-dev.
==> default: Preparing to unpack
.../libmysqlclient-dev_5.5.54-0ubuntu0.14.04.1_amd64.deb ...
==> default: Unpacking libmysqlclient-dev (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package libpoppler-private-dev.
==> default: Preparing to unpack
.../libpoppler-private-dev_0.24.5-2ubuntu4.4_amd64.deb ...
==> default: Unpacking libpoppler-private-dev (0.24.5-2ubuntu4.4) ...
==> default: Selecting previously unselected package libpoppler-dev.
==> default: Preparing to unpack .../libpoppler-dev_0.24.5-2ubuntu4.4_amd64.deb
...
==> default: Unpacking libpoppler-dev (0.24.5-2ubuntu4.4) ...
==> default: Selecting previously unselected package libpoppler-glib-dev.
==> default: Preparing to unpack
.../libpoppler-glib-dev_0.24.5-2ubuntu4.4_amd64.deb ...
==> default: Unpacking libpoppler-glib-dev (0.24.5-2ubuntu4.4) ...
==> default: Selecting previously unselected package libpython-dev:amd64.
==> default: Preparing to unpack .../libpython-dev_2.7.5-5ubuntu3_amd64.deb ...
==> default: Unpacking libpython-dev:amd64 (2.7.5-5ubuntu3) ...
==> default: Selecting previously unselected package libssl-doc.
==> default: Preparing to unpack .../libssl-doc_1.0.1f-1ubuntu2.22_all.deb ...
==> default: Unpacking libssl-doc (1.0.1f-1ubuntu2.22) ...
==> default: Selecting previously unselected package libtool.
==> default: Preparing to unpack .../libtool_2.4.2-1.7ubuntu1_amd64.deb ...
==> default: Unpacking libtool (2.4.2-1.7ubuntu1) ...
==> default: Selecting previously unselected package libutempter0.
==> default: Preparing to unpack .../libutempter0_1.1.5-4build1_amd64.deb ...
==> default: Unpacking libutempter0 (1.1.5-4build1) ...
==> default: Selecting previously unselected package libv8-3.14.5.
==> default: Preparing to unpack .../libv8-3.14.5_3.14.5.8-5ubuntu2_amd64.deb
...
==> default: Unpacking libv8-3.14.5 (3.14.5.8-5ubuntu2) ...
==> default: Selecting previously unselected package libx11-doc.
==> default: Preparing to unpack .../libx11-doc_2%3a1.6.2-1ubuntu2_all.deb ...
==> default: Unpacking libx11-doc (2:1.6.2-1ubuntu2) ...
==> default: Selecting previously unselected package libxt-dev:amd64.
==> default: Preparing to unpack .../libxt-dev_1%3a1.1.4-1_amd64.deb ...
==> default: Unpacking libxt-dev:amd64 (1:1.1.4-1) ...
==> default: Selecting previously unselected package libxmu-headers.
==> default: Preparing to unpack .../libxmu-headers_2%3a1.1.1-1_all.deb ...
==> default: Unpacking libxmu-headers (2:1.1.1-1) ...
==> default: Selecting previously unselected package libxmu-dev:amd64.
==> default: Preparing to unpack .../libxmu-dev_2%3a1.1.1-1_amd64.deb ...
==> default: Unpacking libxmu-dev:amd64 (2:1.1.1-1) ...
==> default: Selecting previously unselected package libxpm-dev:amd64.
==> default: Preparing to unpack .../libxpm-dev_1%3a3.5.10-1ubuntu0.1_amd64.deb
...
==> default: Unpacking libxpm-dev:amd64 (1:3.5.10-1ubuntu0.1) ...
==> default: Selecting previously unselected package libxaw7-dev:amd64.
==> default: Preparing to unpack .../libxaw7-dev_2%3a1.0.12-1_amd64.deb ...
==> default: Unpacking libxaw7-dev:amd64 (2:1.0.12-1) ...
==> default: Selecting previously unselected package x11proto-composite-dev.
==> default: Preparing to unpack .../x11proto-composite-dev_1%3a0.4.2-2_all.deb
...
==> default: Unpacking x11proto-composite-dev (1:0.4.2-2) ...
==> default: Selecting previously unselected package libxcomposite-dev.
==> default: Preparing to unpack .../libxcomposite-dev_1%3a0.4.4-1_amd64.deb ...
==> default: Unpacking libxcomposite-dev (1:0.4.4-1) ...
==> default: Selecting previously unselected package libxcursor-dev:amd64.
==> default: Preparing to unpack .../libxcursor-dev_1%3a1.1.14-1_amd64.deb ...
==> default: Unpacking libxcursor-dev:amd64 (1:1.1.14-1) ...
==> default: Selecting previously unselected package libxfont-dev.
==> default: Preparing to unpack
.../libxfont-dev_1%3a1.4.7-1ubuntu0.2_amd64.deb ...
==> default: Unpacking libxfont-dev (1:1.4.7-1ubuntu0.2) ...
==> default: Selecting previously unselected package libxft-dev.
==> default: Preparing to unpack .../libxft-dev_2.3.1-2_amd64.deb ...
==> default: Unpacking libxft-dev (2.3.1-2) ...
==> default: Selecting previously unselected package libxi-dev.
==> default: Preparing to unpack
.../libxi-dev_2%3a1.7.1.901-1ubuntu1.1_amd64.deb ...
==> default: Unpacking libxi-dev (2:1.7.1.901-1ubuntu1.1) ...
==> default: Selecting previously unselected package x11proto-xinerama-dev.
==> default: Preparing to unpack .../x11proto-xinerama-dev_1.2.1-2_all.deb ...
==> default: Unpacking x11proto-xinerama-dev (1.2.1-2) ...
==> default: Selecting previously unselected package libxinerama-dev:amd64.
==> default: Preparing to unpack .../libxinerama-dev_2%3a1.1.3-1_amd64.deb ...
==> default: Unpacking libxinerama-dev:amd64 (2:1.1.3-1) ...
==> default: Selecting previously unselected package libxkbfile-dev:amd64.
==> default: Preparing to unpack .../libxkbfile-dev_1%3a1.0.8-1_amd64.deb ...
==> default: Unpacking libxkbfile-dev:amd64 (1:1.0.8-1) ...
==> default: Selecting previously unselected package libxml2-dev:amd64.
==> default: Preparing to unpack
.../libxml2-dev_2.9.1+dfsg1-3ubuntu4.8_amd64.deb ...
==> default: Unpacking libxml2-dev:amd64 (2.9.1+dfsg1-3ubuntu4.8) ...
==> default: Selecting previously unselected package libxmuu-dev:amd64.
==> default: Preparing to unpack .../libxmuu-dev_2%3a1.1.1-1_amd64.deb ...
==> default: Unpacking libxmuu-dev:amd64 (2:1.1.1-1) ...
==> default: Selecting previously unselected package x11proto-randr-dev.
==> default: Preparing to unpack .../x11proto-randr-dev_1.5.0-1~trusty1_all.deb
...
==> default: Unpacking x11proto-randr-dev (1.5.0-1~trusty1) ...
==> default: Selecting previously unselected package libxrandr-dev:amd64.
==> default: Preparing to unpack
.../libxrandr-dev_2%3a1.5.0-1~trusty1_amd64.deb ...
==> default: Unpacking libxrandr-dev:amd64 (2:1.5.0-1~trusty1) ...
==> default: Selecting previously unselected package x11proto-resource-dev.
==> default: Preparing to unpack .../x11proto-resource-dev_1.2.0-3_all.deb ...
==> default: Unpacking x11proto-resource-dev (1.2.0-3) ...
==> default: Selecting previously unselected package libxres-dev.
==> default: Preparing to unpack .../libxres-dev_2%3a1.0.7-1_amd64.deb ...
==> default: Unpacking libxres-dev (2:1.0.7-1) ...
==> default: Selecting previously unselected package libxslt1-dev:amd64.
==> default: Preparing to unpack .../libxslt1-dev_1.1.28-2build1_amd64.deb ...
==> default: Unpacking libxslt1-dev:amd64 (1.1.28-2build1) ...
==> default: Selecting previously unselected package x11proto-scrnsaver-dev.
==> default: Preparing to unpack .../x11proto-scrnsaver-dev_1.2.2-1_all.deb ...
==> default: Unpacking x11proto-scrnsaver-dev (1.2.2-1) ...
==> default: Selecting previously unselected package libxss-dev:amd64.
==> default: Preparing to unpack .../libxss-dev_1%3a1.2.2-1_amd64.deb ...
==> default: Unpacking libxss-dev:amd64 (1:1.2.2-1) ...
==> default: Selecting previously unselected package x11proto-record-dev.
==> default: Preparing to unpack .../x11proto-record-dev_1.14.2-1_all.deb ...
==> default: Unpacking x11proto-record-dev (1.14.2-1) ...
==> default: Selecting previously unselected package libxtst-dev:amd64.
==> default: Preparing to unpack .../libxtst-dev_2%3a1.2.2-1_amd64.deb ...
==> default: Unpacking libxtst-dev:amd64 (2:1.2.2-1) ...
==> default: Selecting previously unselected package x11proto-video-dev.
==> default: Preparing to unpack .../x11proto-video-dev_2.3.2-1_all.deb ...
==> default: Unpacking x11proto-video-dev (2.3.2-1) ...
==> default: Selecting previously unselected package libxv-dev:amd64.
==> default: Preparing to unpack .../libxv-dev_2%3a1.0.10-1_amd64.deb ...
==> default: Unpacking libxv-dev:amd64 (2:1.0.10-1) ...
==> default: Selecting previously unselected package libxvmc-dev:amd64.
==> default: Preparing to unpack .../libxvmc-dev_2%3a1.0.8-1ubuntu1_amd64.deb
...
==> default: Unpacking libxvmc-dev:amd64 (2:1.0.8-1ubuntu1) ...
==> default: Selecting previously unselected package x11proto-xf86dga-dev.
==> default: Preparing to unpack .../x11proto-xf86dga-dev_2.1-3_all.deb ...
==> default: Unpacking x11proto-xf86dga-dev (2.1-3) ...
==> default: Selecting previously unselected package libxxf86dga-dev:amd64.
==> default: Preparing to unpack .../libxxf86dga-dev_2%3a1.1.4-1_amd64.deb ...
==> default: Unpacking libxxf86dga-dev:amd64 (2:1.1.4-1) ...
==> default: Selecting previously unselected package lksctp-tools.
==> default: Preparing to unpack .../lksctp-tools_1.0.15+dfsg-1_amd64.deb ...
==> default: Unpacking lksctp-tools (1.0.15+dfsg-1) ...
==> default: Selecting previously unselected package mysql-client.
==> default: Preparing to unpack
.../mysql-client_5.5.54-0ubuntu0.14.04.1_all.deb ...
==> default: Unpacking mysql-client (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package mysql-server.
==> default: Preparing to unpack
.../mysql-server_5.5.54-0ubuntu0.14.04.1_all.deb ...
==> default: Unpacking mysql-server (5.5.54-0ubuntu0.14.04.1) ...
==> default: Selecting previously unselected package policykit-1-gnome.
==> default: Preparing to unpack .../policykit-1-gnome_0.105-1ubuntu4_amd64.deb
...
==> default: Unpacking policykit-1-gnome (0.105-1ubuntu4) ...
==> default: Selecting previously unselected package
texlive-generic-recommended.
==> default: Preparing to unpack
.../texlive-generic-recommended_2013.20140215-1_all.deb ...
==> default: Unpacking texlive-generic-recommended (2013.20140215-1) ...
==> default: Selecting previously unselected package texlive-pstricks.
==> default: Preparing to unpack .../texlive-pstricks_2013.20140215-2_all.deb
...
==> default: Unpacking texlive-pstricks (2013.20140215-2) ...
==> default: Selecting previously unselected package prosper.
==> default: Preparing to unpack .../prosper_1.00.4+cvs.2007.05.01-4_all.deb ...
==> default: Unpacking prosper (1.00.4+cvs.2007.05.01-4) ...
==> default: Selecting previously unselected package ps2eps.
==> default: Preparing to unpack .../ps2eps_1.68-1build1_amd64.deb ...
==> default: Unpacking ps2eps (1.68-1build1) ...
==> default: Selecting previously unselected package python-cairo.
==> default: Preparing to unpack .../python-cairo_1.8.8-1ubuntu5_amd64.deb ...
==> default: Unpacking python-cairo (1.8.8-1ubuntu5) ...
==> default: Selecting previously unselected package python3-pkg-resources.
==> default: Preparing to unpack .../python3-pkg-resources_3.3-1ubuntu2_all.deb
...
==> default: Unpacking python3-pkg-resources (3.3-1ubuntu2) ...
==> default: Selecting previously unselected package python-chardet-whl.
==> default: Preparing to unpack .../python-chardet-whl_2.2.1-2~ubuntu1_all.deb
...
==> default: Unpacking python-chardet-whl (2.2.1-2~ubuntu1) ...
==> default: Selecting previously unselected package python-colorama.
==> default: Preparing to unpack .../python-colorama_0.2.5-0.1ubuntu2_all.deb
...
==> default: Unpacking python-colorama (0.2.5-0.1ubuntu2) ...
==> default: Selecting previously unselected package python-colorama-whl.
==> default: Preparing to unpack
.../python-colorama-whl_0.2.5-0.1ubuntu2_all.deb ...
==> default: Unpacking python-colorama-whl (0.2.5-0.1ubuntu2) ...
==> default: Selecting previously unselected package python-dateutil.
==> default: Preparing to unpack .../python-dateutil_1.5+dfsg-1ubuntu1_all.deb
...
==> default: Unpacking python-dateutil (1.5+dfsg-1ubuntu1) ...
==> default: Selecting previously unselected package python2.7-dev.
==> default: Preparing to unpack .../python2.7-dev_2.7.6-8ubuntu0.3_amd64.deb
...
==> default: Unpacking python2.7-dev (2.7.6-8ubuntu0.3) ...
==> default: Selecting previously unselected package python-dev.
==> default: Preparing to unpack .../python-dev_2.7.5-5ubuntu3_amd64.deb ...
==> default: Unpacking python-dev (2.7.5-5ubuntu3) ...
==> default: Selecting previously unselected package python-distlib.
==> default: Preparing to unpack .../python-distlib_0.1.8-1ubuntu1_all.deb ...
==> default: Unpacking python-distlib (0.1.8-1ubuntu1) ...
==> default: Selecting previously unselected package python-distlib-whl.
==> default: Preparing to unpack .../python-distlib-whl_0.1.8-1ubuntu1_all.deb
...
==> default: Unpacking python-distlib-whl (0.1.8-1ubuntu1) ...
==> default: Selecting previously unselected package python-gobject-2.
==> default: Preparing to unpack .../python-gobject-2_2.28.6-12build1_amd64.deb
...
==> default: Unpacking python-gobject-2 (2.28.6-12build1) ...
==> default: Selecting previously unselected package python-gtk2.
==> default: Preparing to unpack .../python-gtk2_2.24.0-3ubuntu3_amd64.deb ...
==> default: Unpacking python-gtk2 (2.24.0-3ubuntu3) ...
==> default: Selecting previously unselected package python-glade2.
==> default: Preparing to unpack .../python-glade2_2.24.0-3ubuntu3_amd64.deb ...
==> default: Unpacking python-glade2 (2.24.0-3ubuntu3) ...
==> default: Selecting previously unselected package python-html5lib.
==> default: Preparing to unpack .../python-html5lib_0.999-3~ubuntu1_all.deb ...
==> default: Unpacking python-html5lib (0.999-3~ubuntu1) ...
==> default: Selecting previously unselected package python-html5lib-whl.
==> default: Preparing to unpack
.../python-html5lib-whl_0.999-3~ubuntu1_all.deb ...
==> default: Unpacking python-html5lib-whl (0.999-3~ubuntu1) ...
==> default: Selecting previously unselected package python-pil.
==> default: Preparing to unpack .../python-pil_2.3.0-1ubuntu3.3_amd64.deb ...
==> default: Unpacking python-pil (2.3.0-1ubuntu3.3) ...
==> default: Selecting previously unselected package python-imaging.
==> default: Preparing to unpack .../python-imaging_2.3.0-1ubuntu3.3_all.deb ...
==> default: Unpacking python-imaging (2.3.0-1ubuntu3.3) ...
==> default: Selecting previously unselected package python-libxml2.
==> default: Preparing to unpack
.../python-libxml2_2.9.1+dfsg1-3ubuntu4.8_amd64.deb ...
==> default: Unpacking python-libxml2 (2.9.1+dfsg1-3ubuntu4.8) ...
==> default: Selecting previously unselected package python-lxml.
==> default: Preparing to unpack .../python-lxml_3.3.3-1ubuntu0.1_amd64.deb ...
==> default: Unpacking python-lxml (3.3.3-1ubuntu0.1) ...
==> default: Selecting previously unselected package python-matplotlib-data.
==> default: Preparing to unpack
.../python-matplotlib-data_1.3.1-1ubuntu5_all.deb ...
==> default: Unpacking python-matplotlib-data (1.3.1-1ubuntu5) ...
==> default: Selecting previously unselected package python-pyparsing.
==> default: Preparing to unpack
.../python-pyparsing_2.0.1+dfsg1-1build1_all.deb ...
==> default: Unpacking python-pyparsing (2.0.1+dfsg1-1build1) ...
==> default: Selecting previously unselected package python-tz.
==> default: Preparing to unpack .../python-tz_2012c-1ubuntu0.1_all.deb ...
==> default: Unpacking python-tz (2012c-1ubuntu0.1) ...
==> default: Selecting previously unselected package python-numpy.
==> default: Preparing to unpack
.../python-numpy_1%3a1.8.2-0ubuntu0.1_amd64.deb ...
==> default: Unpacking python-numpy (1:1.8.2-0ubuntu0.1) ...
==> default: Selecting previously unselected package python-support.
==> default: Preparing to unpack .../python-support_1.0.15_all.deb ...
==> default: Unpacking python-support (1.0.15) ...
==> default: Selecting previously unselected package python-matplotlib.
==> default: Preparing to unpack .../python-matplotlib_1.3.1-1ubuntu5_amd64.deb
...
==> default: Unpacking python-matplotlib (1.3.1-1ubuntu5) ...
==> default: Selecting previously unselected package python-notify.
==> default: Preparing to unpack .../python-notify_0.1.1-3ubuntu2_amd64.deb ...
==> default: Unpacking python-notify (0.1.1-3ubuntu2) ...
==> default: Selecting previously unselected package python-six-whl.
==> default: Preparing to unpack .../python-six-whl_1.5.2-1ubuntu1_all.deb ...
==> default: Unpacking python-six-whl (1.5.2-1ubuntu1) ...
==> default: Selecting previously unselected package python-urllib3-whl.
==> default: Preparing to unpack .../python-urllib3-whl_1.7.1-1ubuntu4_all.deb
...
==> default: Unpacking python-urllib3-whl (1.7.1-1ubuntu4) ...
==> default: Selecting previously unselected package python-requests-whl.
==> default: Preparing to unpack
.../python-requests-whl_2.2.1-1ubuntu0.3_all.deb ...
==> default: Unpacking python-requests-whl (2.2.1-1ubuntu0.3) ...
==> default: Selecting previously unselected package python-setuptools-whl.
==> default: Preparing to unpack .../python-setuptools-whl_3.3-1ubuntu2_all.deb
...
==> default: Unpacking python-setuptools-whl (3.3-1ubuntu2) ...
==> default: Selecting previously unselected package python-pip-whl.
==> default: Preparing to unpack .../python-pip-whl_1.5.4-1ubuntu4_all.deb ...
==> default: Unpacking python-pip-whl (1.5.4-1ubuntu4) ...
==> default: Selecting previously unselected package python-setuptools.
==> default: Preparing to unpack .../python-setuptools_3.3-1ubuntu2_all.deb ...
==> default: Unpacking python-setuptools (3.3-1ubuntu2) ...
==> default: Selecting previously unselected package python-pip.
==> default: Preparing to unpack .../python-pip_1.5.4-1ubuntu4_all.deb ...
==> default: Unpacking python-pip (1.5.4-1ubuntu4) ...
==> default: Selecting previously unselected package python-tk.
==> default: Preparing to unpack .../python-tk_2.7.5-1ubuntu1_amd64.deb ...
==> default: Unpacking python-tk (2.7.5-1ubuntu1) ...
==> default: Selecting previously unselected package python-wheel.
==> default: Preparing to unpack .../python-wheel_0.24.0-1~ubuntu1_all.deb ...
==> default: Unpacking python-wheel (0.24.0-1~ubuntu1) ...
==> default: Selecting previously unselected package sinntp.
==> default: Preparing to unpack .../archives/sinntp_1.5-1_all.deb ...
==> default: Unpacking sinntp (1.5-1) ...
==> default: Selecting previously unselected package sloccount.
==> default: Preparing to unpack .../sloccount_2.26-5.1_amd64.deb ...
==> default: Unpacking sloccount (2.26-5.1) ...
==> default: Selecting previously unselected package subversion.
==> default: Preparing to unpack .../subversion_1.8.8-1ubuntu3.2_amd64.deb ...
==> default: Unpacking subversion (1.8.8-1ubuntu3.2) ...
==> default: Selecting previously unselected package tcl8.6.
==> default: Preparing to unpack .../tcl8.6_8.6.1-4ubuntu1_amd64.deb ...
==> default: Unpacking tcl8.6 (8.6.1-4ubuntu1) ...
==> default: Selecting previously unselected package tcl.
==> default: Preparing to unpack .../tcl_8.6.0+6ubuntu3_amd64.deb ...
==> default: Unpacking tcl (8.6.0+6ubuntu3) ...
==> default: Selecting previously unselected package texlive-fonts-recommended.
==> default: Preparing to unpack
.../texlive-fonts-recommended_2013.20140215-1_all.deb ...
==> default: Unpacking texlive-fonts-recommended (2013.20140215-1) ...
==> default: Selecting previously unselected package texlive.
==> default: Preparing to unpack .../texlive_2013.20140215-1_all.deb ...
==> default: Unpacking texlive (2013.20140215-1) ...
==> default: Selecting previously unselected package texlive-extra-utils.
==> default: Preparing to unpack
.../texlive-extra-utils_2013.20140215-2_all.deb ...
==> default: Unpacking texlive-extra-utils (2013.20140215-2) ...
==> default: Selecting previously unselected package texlive-font-utils.
==> default: Preparing to unpack .../texlive-font-utils_2013.20140215-2_all.deb
...
==> default: Unpacking texlive-font-utils (2013.20140215-2) ...
==> default: Selecting previously unselected package
texlive-fonts-recommended-doc.
==> default: Preparing to unpack
.../texlive-fonts-recommended-doc_2013.20140215-1_all.deb ...
==> default: Unpacking texlive-fonts-recommended-doc (2013.20140215-1) ...
==> default: Selecting previously unselected package texlive-latex-base-doc.
==> default: Preparing to unpack
.../texlive-latex-base-doc_2013.20140215-1_all.deb ...
==> default: Unpacking texlive-latex-base-doc (2013.20140215-1) ...
==> default: Selecting previously unselected package
texlive-latex-recommended-doc.
==> default: Preparing to unpack
.../texlive-latex-recommended-doc_2013.20140215-1_all.deb ...
==> default: Unpacking texlive-latex-recommended-doc (2013.20140215-1) ...
==> default: Selecting previously unselected package texlive-luatex.
==> default: Preparing to unpack .../texlive-luatex_2013.20140215-1_all.deb ...
==> default: Unpacking texlive-luatex (2013.20140215-1) ...
==> default: Selecting previously unselected package texlive-pstricks-doc.
==> default: Preparing to unpack
.../texlive-pstricks-doc_2013.20140215-2_all.deb ...
==> default: Unpacking texlive-pstricks-doc (2013.20140215-2) ...
==> default: Selecting previously unselected package tipa.
==> default: Preparing to unpack .../tipa_2%3a1.3-19_all.deb ...
==> default: Unpacking tipa (2:1.3-19) ...
==> default: Selecting previously unselected package tk8.6.
==> default: Preparing to unpack .../tk8.6_8.6.1-3ubuntu2_amd64.deb ...
==> default: Unpacking tk8.6 (8.6.1-3ubuntu2) ...
==> default: Selecting previously unselected package tk.
==> default: Preparing to unpack .../tk_8.6.0+6ubuntu3_amd64.deb ...
==> default: Unpacking tk (8.6.0+6ubuntu3) ...
==> default: Selecting previously unselected package x11-xserver-utils.
==> default: Preparing to unpack .../x11-xserver-utils_7.7+2ubuntu1_amd64.deb
...
==> default: Unpacking x11-xserver-utils (7.7+2ubuntu1) ...
==> default: Selecting previously unselected package x11proto-bigreqs-dev.
==> default: Preparing to unpack .../x11proto-bigreqs-dev_1%3a1.1.2-1_all.deb
...
==> default: Unpacking x11proto-bigreqs-dev (1:1.1.2-1) ...
==> default: Selecting previously unselected package x11proto-dri3-dev.
==> default: Preparing to unpack .../x11proto-dri3-dev_1.0-1_all.deb ...
==> default: Unpacking x11proto-dri3-dev (1.0-1) ...
==> default: Selecting previously unselected package x11proto-present-dev.
==> default: Preparing to unpack .../x11proto-present-dev_1.0-1_all.deb ...
==> default: Unpacking x11proto-present-dev (1.0-1) ...
==> default: Selecting previously unselected package x11proto-xcmisc-dev.
==> default: Preparing to unpack .../x11proto-xcmisc-dev_1.2.2-1_all.deb ...
==> default: Unpacking x11proto-xcmisc-dev (1.2.2-1) ...
==> default: Selecting previously unselected package x11proto-xf86bigfont-dev.
==> default: Preparing to unpack .../x11proto-xf86bigfont-dev_1.2.0-3_all.deb
...
==> default: Unpacking x11proto-xf86bigfont-dev (1.2.0-3) ...
==> default: Selecting previously unselected package x11proto-xf86dri-dev.
==> default: Preparing to unpack .../x11proto-xf86dri-dev_2.1.1-2_all.deb ...
==> default: Unpacking x11proto-xf86dri-dev (2.1.1-2) ...
==> default: Selecting previously unselected package xbitmaps.
==> default: Preparing to unpack .../xbitmaps_1.1.1-2_all.deb ...
==> default: Unpacking xbitmaps (1.1.1-2) ...
==> default: Selecting previously unselected package libpciaccess-dev:amd64.
==> default: Preparing to unpack .../libpciaccess-dev_0.13.2-1_amd64.deb ...
==> default: Unpacking libpciaccess-dev:amd64 (0.13.2-1) ...
==> default: Selecting previously unselected package xserver-xorg-dev.
==> default: Preparing to unpack
.../xserver-xorg-dev_2%3a1.15.1-0ubuntu2.7_amd64.deb ...
==> default: Unpacking xserver-xorg-dev (2:1.15.1-0ubuntu2.7) ...
==> default: Selecting previously unselected package xorg-dev.
==> default: Preparing to unpack .../xorg-dev_1%3a7.7+1ubuntu8.1_all.deb ...
==> default: Unpacking xorg-dev (1:7.7+1ubuntu8.1) ...
==> default: Selecting previously unselected package xsltproc.
==> default: Preparing to unpack .../xsltproc_1.1.28-2build1_amd64.deb ...
==> default: Unpacking xsltproc (1.1.28-2build1) ...
==> default: Selecting previously unselected package xterm.
==> default: Preparing to unpack .../xterm_297-1ubuntu1_amd64.deb ...
==> default: Unpacking xterm (297-1ubuntu1) ...
==> default: Selecting previously unselected package libyaml-dev:amd64.
==> default: Preparing to unpack .../libyaml-dev_0.1.4-3ubuntu3.1_amd64.deb ...
==> default: Unpacking libyaml-dev:amd64 (0.1.4-3ubuntu3.1) ...
==> default: Selecting previously unselected package nodejs.
==> default: Preparing to unpack .../nodejs_0.10.25~dfsg2-2ubuntu1_amd64.deb ...
==> default: Unpacking nodejs (0.10.25~dfsg2-2ubuntu1) ...
==> default: Selecting previously unselected package python-mock.
==> default: Preparing to unpack .../python-mock_1.0.1-3_all.deb ...
==> default: Unpacking python-mock (1.0.1-3) ...
==> default: Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
==> default: Processing triggers for ureadahead (0.100.0-16) ...
==> default: Processing triggers for fontconfig (2.11.0-0ubuntu4.2) ...
==> default: Processing triggers for mime-support (3.54ubuntu1.1) ...
==> default: Processing triggers for libglib2.0-0:amd64 (2.40.2-0ubuntu1) ...
==> default: Processing triggers for install-info (5.2.0.dfsg.1-2) ...
==> default: Processing triggers for hicolor-icon-theme (0.13-1) ...
==> default: Setting up libgnutls26:amd64 (2.12.23-12ubuntu2.6) ...
==> default: Setting up libgnutls-openssl27:amd64 (2.12.23-12ubuntu2.6) ...
==> default: Setting up libssl1.0.0:amd64 (1.0.1f-1ubuntu2.22) ...
==> default: Setting up libkrb5support0:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libk5crypto3:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libkrb5-3:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libgssapi-krb5-2:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libaio1:amd64 (0.3.109-4) ...
==> default: Setting up libapr1:amd64 (1.5.0-1) ...
==> default: Setting up libaprutil1:amd64 (1.5.3-1) ...
==> default: Setting up liblzo2-2:amd64 (2.06-1.2ubuntu1.1) ...
==> default: Setting up libnettle4:amd64 (2.7.1-1ubuntu0.2) ...
==> default: Setting up libarchive13:amd64 (3.1.2-7ubuntu2.3) ...
==> default: Setting up libasyncns0:amd64 (0.8-4ubuntu2) ...
==> default: Setting up libatasmart4:amd64 (0.19-3) ...
==> default: Setting up libgtk2.0-common (2.24.23-0ubuntu1.4) ...
==> default: Setting up libcups2:amd64 (1.7.2-0ubuntu1.8) ...
==> default: Setting up libgtk2.0-0:amd64 (2.24.23-0ubuntu1.4) ...
==> default: Setting up libnspr4:amd64 (2:4.12-0ubuntu0.14.04.1) ...
==> default: Setting up tzdata-java (2016j-0ubuntu0.14.04) ...
==> default: Setting up java-common (0.51) ...
==> default: Setting up libpcsclite1:amd64 (1.8.10-1ubuntu1.1) ...
==> default: Setting up libflac8:amd64 (1.3.0-2ubuntu0.14.04.1) ...
==> default: Setting up libvorbisenc2:amd64 (1.3.2-1.3ubuntu1) ...
==> default: Setting up libsndfile1:amd64 (1.0.25-7ubuntu2.1) ...
==> default: Setting up libpulse0:amd64 (1:4.0-0ubuntu11.1) ...
==> default: Setting up libsctp1:amd64 (1.0.15+dfsg-1) ...
==> default: Setting up libgif4:amd64 (4.1.6-11) ...
==> default: Setting up libavahi-glib1:amd64 (0.6.31-4ubuntu1.1) ...
==> default: Setting up libbonobo2-common (2.32.1-0ubuntu5) ...
==> default: Setting up libidl-common (0.8.14-0.2ubuntu4) ...
==> default: Setting up libidl0:amd64 (0.8.14-0.2ubuntu4) ...
==> default: Setting up liborbit-2-0:amd64 (1:2.14.19-0.3) ...
==> default: Setting up liborbit2:amd64 (1:2.14.19-0.3) ...
==> default: Setting up libbonobo2-0:amd64 (2.32.1-0ubuntu5) ...
==> default: Setting up libboost-system1.54.0:amd64 (1.54.0-4ubuntu3.1) ...
==> default: Setting up libcairo-script-interpreter2:amd64
(1.13.0~20140204-0ubuntu1.1) ...
==> default: Setting up libcupsfilters1:amd64 (1.0.52-0ubuntu1.7) ...
==> default: Setting up libcupsimage2:amd64 (1.7.2-0ubuntu1.8) ...
==> default: Setting up libdmx1:amd64 (1:1.1.3-1) ...
==> default: Setting up libdrm-amdgpu1:amd64 (2.4.67-1ubuntu0.14.04.1) ...
==> default: Setting up libwayland-server0:amd64 (1.4.0-1ubuntu1) ...
==> default: Setting up libgbm1:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Setting up libxcb-xfixes0:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libegl1-mesa:amd64 (10.1.3-0ubuntu0.6) ...
==> default: update-alternatives:
==> default: using /usr/lib/x86_64-linux-gnu/mesa-egl/ld.so.conf to provide
/etc/ld.so.conf.d/x86_64-linux-gnu_EGL.conf (x86_64-linux-gnu_egl_conf) in auto
mode
==> default: Setting up libopenvg1-mesa:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Setting up libwayland-egl1-mesa:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Setting up libegl1-mesa-drivers:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Setting up libelfg0:amd64 (0.8.13-5) ...
==> default: Setting up libfs6:amd64 (2:1.0.5-1) ...
==> default: Setting up gconf2-common (3.2.6-0ubuntu2) ...
==> default: Creating config file /etc/gconf/2/path with new version
==> default: Setting up libgconf-2-4:amd64 (3.2.6-0ubuntu2) ...
==> default: Setting up libgfortran3:amd64 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Setting up libglade2-0:amd64 (1:2.6.4-2) ...
==> default: Setting up libgles2-mesa:amd64 (10.1.3-0ubuntu0.6) ...
==> default: Setting up dbus-x11 (1.6.18-0ubuntu4.5) ...
==> default: Setting up libgssrpc4:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libhunspell-1.3-0:amd64 (1.3.2-6ubuntu2.1) ...
==> default: Setting up libkadm5clnt-mit9:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libkdb5-7:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libkadm5srv-mit9:amd64 (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libprotobuf8:amd64 (2.5.0-9ubuntu1) ...
==> default: Setting up libmirprotobuf0:amd64 (0.1.8+14.04.20140411-0ubuntu1)
...
==> default: Setting up libmysqlclient18:amd64 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Setting up libpaper1:amd64 (1.1.24+nmu2ubuntu3) ...
==> default: Creating config file /etc/papersize with new version
==> default: Setting up libpcrecpp0:amd64 (1:8.31-2ubuntu2.3) ...
==> default: Setting up libpoppler44:amd64 (0.24.5-2ubuntu4.4) ...
==> default: Setting up libpoppler-glib8:amd64 (0.24.5-2ubuntu4.4) ...
==> default: Setting up libexpat1-dev:amd64 (2.1.0-4ubuntu1.3) ...
==> default: Setting up libpython2.7-dev:amd64 (2.7.6-8ubuntu0.3) ...
==> default: Setting up libsecret-common (0.16-0ubuntu1) ...
==> default: Setting up libsecret-1-0:amd64 (0.16-0ubuntu1) ...
==> default: Setting up libserf-1-1:amd64 (1.3.3-1ubuntu0.1) ...
==> default: Setting up libsvn1:amd64 (1.8.8-1ubuntu3.2) ...
==> default: Setting up libtcl8.6:amd64 (8.6.1-4ubuntu1) ...
==> default: Setting up libxft2:amd64 (2.3.1-2) ...
==> default: Setting up libxss1:amd64 (1:1.2.2-1) ...
==> default: Setting up libtk8.6:amd64 (8.6.1-3ubuntu2) ...
==> default: Setting up libudisks2-0:amd64 (2.1.3-1ubuntu0.1) ...
==> default: Setting up libxcb-randr0:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-shape0:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxpm4:amd64 (1:3.5.10-1ubuntu0.1) ...
==> default: Setting up libxres1:amd64 (2:1.0.7-1) ...
==> default: Setting up libxslt1.1:amd64 (1.1.28-2build1) ...
==> default: Setting up libxv1:amd64 (2:1.0.10-1) ...
==> default: Setting up libxvmc1:amd64 (2:1.0.8-1ubuntu1) ...
==> default: Setting up libxxf86dga1:amd64 (2:1.1.4-1) ...
==> default: Setting up tex-common (4.04) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: texlive-base is not ready, delaying updmap-sys call
==> default: texlive-base is not ready, skipping fmtutil-sys --all call
==> default: Setting up fonts-lmodern (2.004.4-3) ...
==> default: Setting up libdbi-perl (1.630-1) ...
==> default: Setting up libdbd-mysql-perl (4.025-1ubuntu0.1) ...
==> default: Setting up libterm-readkey-perl (2.31-1) ...
==> default: Setting up mysql-client-core-5.5 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Setting up mysql-client-5.5 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Setting up mysql-server-core-5.5 (5.5.54-0ubuntu0.14.04.1) ...
==> default: Setting up mysql-server-5.5 (5.5.54-0ubuntu0.14.04.1) ...
==> default: mysql start/running, process 20901
==> default: Setting up poppler-data (0.4.6-4) ...
==> default: Setting up fonts-texgyre (2.004.2-4) ...
==> default: Setting up libc-ares2:amd64 (1.10.0-2ubuntu0.1) ...
==> default: Setting up libglu1-mesa:amd64 (9.0.0-2) ...
==> default: Setting up libgnutlsxx27:amd64 (2.12.23-12ubuntu2.6) ...
==> default: Setting up libwebp5:amd64 (0.4.0-4) ...
==> default: Setting up libwebpmux1:amd64 (0.4.0-4) ...
==> default: Setting up astyle (2.03-1) ...
==> default: Setting up autotools-dev (20130810.1) ...
==> default: Setting up libstdc++-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Setting up g++-4.8 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Setting up g++ (4:4.8.2-1ubuntu6) ...
==> default: update-alternatives:
==> default: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
==> default: Setting up libdpkg-perl (1.17.5ubuntu5.7) ...
==> default: Setting up dpkg-dev (1.17.5ubuntu5.7) ...
==> default: Setting up build-essential (11.6ubuntu6) ...
==> default: Setting up desktop-file-utils (0.22-1ubuntu1) ...
==> default: Setting up dictionaries-common (1.20.5) ...
==> default: Setting up doxygen (1.8.6-2) ...
==> default: Setting up exuberant-ctags (1:5.9~svn20110310-7ubuntu0.1) ...
==> default: update-alternatives:
==> default: using /usr/bin/ctags-exuberant to provide /usr/bin/ctags (ctags)
in auto mode
==> default: update-alternatives:
==> default: using /usr/bin/ctags-exuberant to provide /usr/bin/etags (etags)
in auto mode
==> default: Setting up fonts-dejavu-extra (2.34-1ubuntu1) ...
==> default: Setting up fonts-liberation (1.07.3-3) ...
==> default: Setting up fonts-lyx (2.0.8.1-0ubuntu1) ...
==> default: Setting up libgfortran-4.8-dev:amd64 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Setting up gfortran-4.8 (4.8.4-2ubuntu1~14.04.3) ...
==> default: Setting up gfortran (4:4.8.2-1ubuntu6) ...
==> default: update-alternatives:
==> default: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
==> default: Setting up libijs-0.35 (0.35-8build1) ...
==> default: Setting up libjbig2dec0 (0.11+20120125-1ubuntu1) ...
==> default: Setting up libgs9-common (9.10~dfsg-0ubuntu10.6) ...
==> default: update-alternatives:
==> default: using /usr/share/ghostscript/9.10 to provide
/usr/share/ghostscript/current (ghostscript-current) in auto mode
==> default: Setting up libgs9 (9.10~dfsg-0ubuntu10.6) ...
==> default: Setting up gsfonts (1:8.11+urwcyr1.0.7~pre44-4.2ubuntu1) ...
==> default: Setting up ghostscript (9.10~dfsg-0ubuntu10.6) ...
==> default: Setting up gir1.2-freedesktop (1.40.0-1ubuntu0.2) ...
==> default: Setting up gir1.2-poppler-0.18 (0.24.5-2ubuntu4.4) ...
==> default: Setting up liberror-perl (0.17-1.1) ...
==> default: Setting up git-man (1:1.9.1-1ubuntu0.3) ...
==> default: Setting up git (1:1.9.1-1ubuntu0.3) ...
==> default: Setting up libcdt5 (2.36.0-0ubuntu3.1) ...
==> default: Setting up libcgraph6 (2.36.0-0ubuntu3.1) ...
==> default: Setting up libpathplan4 (2.36.0-0ubuntu3.1) ...
==> default: Setting up libgvc6 (2.36.0-0ubuntu3.1) ...
==> default: Setting up libgvpr2 (2.36.0-0ubuntu3.1) ...
==> default: Setting up graphviz (2.36.0-0ubuntu3.1) ...
==> default: Setting up x11-utils (7.7+1) ...
==> default: Setting up udisks2 (2.1.3-1ubuntu0.1) ...
==> default: Setting up gvfs-common (1.20.3-0ubuntu1.2) ...
==> default: Setting up gvfs-libs:amd64 (1.20.3-0ubuntu1.2) ...
==> default: Setting up gvfs-daemons (1.20.3-0ubuntu1.2) ...
==> default: Setting up gvfs:amd64 (1.20.3-0ubuntu1.2) ...
==> default: Setting up comerr-dev (2.1-1.42.9-3ubuntu1.3) ...
==> default: Setting up krb5-multidev (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libkpathsea6 (2013.20130729.30972-2build3) ...
==> default: Setting up libptexenc1 (2013.20130729.30972-2build3) ...
==> default: Setting up texlive-binaries (2013.20130729.30972-2build3) ...
==> default: update-alternatives:
==> default: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in
auto mode
==> default: update-alternatives:
==> default: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex)
in auto mode
==> default: Building format(s) --refresh.
==> default: This may take some time...
==> default: done.
==> default: Setting up xdg-utils (1.1.0~rc1-2ubuntu7.1) ...
==> default: Setting up luatex (0.76.0-3ubuntu1) ...
==> default: texlive-base is not ready, cannot create formats
==> default: Setting up libpaper-utils (1.1.24+nmu2ubuntu3) ...
==> default: Setting up texlive-base (2013.20140215-1) ...
==> default: /usr/bin/tl-paper: setting paper size for dvips to a4.
==> default: /usr/bin/tl-paper: setting paper size for dvipdfmx to a4.
==> default: /usr/bin/tl-paper: setting paper size for xdvi to a4.
==> default: /usr/bin/tl-paper: setting paper size for pdftex to a4.
==> default: /usr/bin/tl-paper: setting paper size for dvipdfmx to letter.
==> default: /usr/bin/tl-paper: setting paper size for dvips to letter.
==> default: /usr/bin/tl-paper: setting paper size for pdftex to letter.
==> default: /usr/bin/tl-paper: setting paper size for xdvi to letter.
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Building format(s) --refresh.
==> default: This may take some time...
==> default: done.
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Building format(s) --all.
==> default: This may take some time...
==> default: done.
==> default: Setting up libalgorithm-diff-perl (1.19.02-3) ...
==> default: Setting up libalgorithm-diff-xs-perl (0.04-2build4) ...
==> default: Setting up libalgorithm-merge-perl (0.08-2) ...
==> default: Setting up libblas3 (1.2.20110419-7) ...
==> default: update-alternatives:
==> default: using /usr/lib/libblas/libblas.so.3 to provide
/usr/lib/libblas.so.3 (libblas.so.3) in auto mode
==> default: Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-1ubuntu1) ...
==> default: Setting up libpng12-dev (1.2.50-1ubuntu2.14.04.2) ...
==> default: Setting up libfreetype6-dev (2.5.2-1ubuntu2.5) ...
==> default: Setting up pkg-config (0.26-1ubuntu4) ...
==> default: Setting up libfontconfig1-dev (2.11.0-0ubuntu4.2) ...
==> default: Setting up xorg-sgml-doctools (1:1.11-1) ...
==> default: Setting up x11proto-core-dev (7.0.26-1~ubuntu2) ...
==> default: Setting up libxau-dev:amd64 (1:1.0.8-1) ...
==> default: Setting up libxdmcp-dev:amd64 (1:1.1.1-1) ...
==> default: Setting up x11proto-input-dev (2.3-1) ...
==> default: Setting up x11proto-kb-dev (1.0.6-2) ...
==> default: Setting up xtrans-dev (1.3.5-1~ubuntu14.04.1) ...
==> default: Setting up libpthread-stubs0-dev:amd64 (0.3-4) ...
==> default: Setting up libxcb1-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libx11-dev:amd64 (2:1.6.2-1ubuntu2) ...
==> default: Setting up x11proto-render-dev (2:0.11.1-2) ...
==> default: Setting up libxrender-dev:amd64 (1:0.9.8-1build0.14.04.1) ...
==> default: Setting up libice-dev:amd64 (2:1.0.8-2) ...
==> default: Setting up libsm-dev:amd64 (2:1.2.1-2) ...
==> default: Setting up libpixman-1-dev (0.30.2-2ubuntu1.1) ...
==> default: Setting up libxcb-render0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-shm0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up x11proto-xext-dev (7.3.0-1) ...
==> default: Setting up libxext-dev:amd64 (2:1.3.2-1ubuntu0.0.14.04.1) ...
==> default: Setting up libglib2.0-bin (2.40.2-0ubuntu1) ...
==> default: Setting up libpcre3-dev:amd64 (1:8.31-2ubuntu2.3) ...
==> default: Setting up libglib2.0-dev (2.40.2-0ubuntu1) ...
==> default: Setting up libcairo2-dev (1.13.0~20140204-0ubuntu1.1) ...
==> default: Setting up libidn11-dev (1.28-1ubuntu2.1) ...
==> default: Setting up libkrb5-dev (1.12+dfsg-2ubuntu5.3) ...
==> default: Setting up libldap2-dev:amd64 (2.4.31-1+nmu2ubuntu8.3) ...
==> default: Setting up libgpg-error-dev (1.12-0.2ubuntu1) ...
==> default: Setting up libgcrypt11-dev (1.5.3-2ubuntu4.4) ...
==> default: Setting up libtasn1-6-dev (3.4-3ubuntu0.4) ...
==> default: Setting up libp11-kit-dev (0.20.2-2ubuntu2) ...
==> default: Setting up libgnutls-dev (2.12.23-12ubuntu2.6) ...
==> default: Setting up librtmp-dev (2.4+20121230.gitdf6c518-1) ...
==> default: Setting up libssl-dev:amd64 (1.0.1f-1ubuntu2.22) ...
==> default: Setting up libcurl4-openssl-dev:amd64 (7.35.0-1ubuntu2.10) ...
==> default: Setting up x11proto-dmx-dev (1:2.3.1-2) ...
==> default: Setting up libdmx-dev:amd64 (1:1.1.3-1) ...
==> default: Setting up libdrm-dev:amd64 (2.4.67-1ubuntu0.14.04.1) ...
==> default: Setting up x11proto-dri2-dev (2.8-2) ...
==> default: Setting up x11proto-gl-dev (1.4.17-1) ...
==> default: Setting up x11proto-xf86vidmode-dev (2.3.1-2) ...
==> default: Setting up libxxf86vm-dev:amd64 (1:1.1.3-1) ...
==> default: Setting up x11proto-fixes-dev (1:5.0-2ubuntu2) ...
==> default: Setting up libxfixes-dev:amd64 (1:5.0.1-1ubuntu1.1) ...
==> default: Setting up x11proto-damage-dev (1:1.2.1-2) ...
==> default: Setting up libxdamage-dev:amd64 (1:1.1.4-1ubuntu1) ...
==> default: Setting up libxcb-glx0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-dri2-0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-dri3-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-randr0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-shape0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-xfixes0-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-sync-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxcb-present-dev:amd64 (1.10-2ubuntu1) ...
==> default: Setting up libxshmfence-dev:amd64 (1.1-2) ...
==> default: Setting up libx11-xcb-dev:amd64 (2:1.6.2-1ubuntu2) ...
==> default: Setting up libprotobuf-lite8:amd64 (2.5.0-9ubuntu1) ...
==> default: Setting up libprotobuf-dev:amd64 (2.5.0-9ubuntu1) ...
==> default: Setting up libmirprotobuf-dev:amd64
(0.1.8+14.04.20140411-0ubuntu1) ...
==> default: Setting up mircommon-dev:amd64 (0.1.8+14.04.20140411-0ubuntu1) ...
==> default: Setting up libwayland-dev (1.4.0-1ubuntu1) ...
==> default: Setting up libfile-basedir-perl (0.03-1fakesync1) ...
==> default: Setting up libfile-desktopentry-perl (0.07-1) ...
==> default: Setting up libfile-fcntllock-perl (0.14-2build1) ...
==> default: Setting up libfile-mimeinfo-perl (0.22-1) ...
==> default: Setting up libfontenc-dev:amd64 (1:1.1.2-1) ...
==> default: Setting up x11proto-fonts-dev (2.1.3-1~ubuntu2) ...
==> default: Setting up libfs-dev:amd64 (2:1.0.5-1) ...
==> default: Setting up mesa-common-dev (10.1.3-0ubuntu0.6) ...
==> default: Setting up libgl1-mesa-dev (10.1.3-0ubuntu0.6) ...
==> default: Setting up libglu1-mesa-dev (9.0.0-2) ...
==> default: Setting up libxdot4 (2.36.0-0ubuntu3.1) ...
==> default: Setting up libltdl-dev:amd64 (2.4.2-1.7ubuntu1) ...
==> default: Setting up libgraphviz-dev (2.36.0-0ubuntu3.1) ...
==> default: Setting up libgtk2.0-bin (2.24.23-0ubuntu1.4) ...
==> default: Setting up libhtml-template-perl (2.95-1) ...
==> default: Setting up libhunspell-dev:amd64 (1.3.2-6ubuntu2.1) ...
==> default: Setting up liblapack3 (3.5.0-2ubuntu1) ...
==> default: update-alternatives:
==> default: using /usr/lib/lapack/liblapack.so.3 to provide
/usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
==> default: Setting up libmysqlclient-dev (5.5.54-0ubuntu0.14.04.1) ...
==> default: Setting up libpython-dev:amd64 (2.7.5-5ubuntu3) ...
==> default: Setting up libssl-doc (1.0.1f-1ubuntu2.22) ...
==> default: Setting up libtool (2.4.2-1.7ubuntu1) ...
==> default: Setting up libutempter0 (1.1.5-4build1) ...
==> default: Creating utempter group...
==> default: Setting up libv8-3.14.5 (3.14.5.8-5ubuntu2) ...
==> default: Setting up libx11-doc (2:1.6.2-1ubuntu2) ...
==> default: Setting up libxt-dev:amd64 (1:1.1.4-1) ...
==> default: Setting up libxmu-headers (2:1.1.1-1) ...
==> default: Setting up libxmu-dev:amd64 (2:1.1.1-1) ...
==> default: Setting up libxpm-dev:amd64 (1:3.5.10-1ubuntu0.1) ...
==> default: Setting up libxaw7-dev:amd64 (2:1.0.12-1) ...
==> default: Setting up x11proto-composite-dev (1:0.4.2-2) ...
==> default: Setting up libxcomposite-dev (1:0.4.4-1) ...
==> default: Setting up libxcursor-dev:amd64 (1:1.1.14-1) ...
==> default: Setting up libxfont-dev (1:1.4.7-1ubuntu0.2) ...
==> default: Setting up libxft-dev (2.3.1-2) ...
==> default: Setting up libxi-dev (2:1.7.1.901-1ubuntu1.1) ...
==> default: Setting up x11proto-xinerama-dev (1.2.1-2) ...
==> default: Setting up libxinerama-dev:amd64 (2:1.1.3-1) ...
==> default: Setting up libxkbfile-dev:amd64 (1:1.0.8-1) ...
==> default: Setting up libxml2-dev:amd64 (2.9.1+dfsg1-3ubuntu4.8) ...
==> default: Setting up libxmuu-dev:amd64 (2:1.1.1-1) ...
==> default: Setting up x11proto-randr-dev (1.5.0-1~trusty1) ...
==> default: Setting up libxrandr-dev:amd64 (2:1.5.0-1~trusty1) ...
==> default: Setting up x11proto-resource-dev (1.2.0-3) ...
==> default: Setting up libxres-dev (2:1.0.7-1) ...
==> default: Setting up libxslt1-dev:amd64 (1.1.28-2build1) ...
==> default: Setting up x11proto-scrnsaver-dev (1.2.2-1) ...
==> default: Setting up libxss-dev:amd64 (1:1.2.2-1) ...
==> default: Setting up x11proto-record-dev (1.14.2-1) ...
==> default: Setting up libxtst-dev:amd64 (2:1.2.2-1) ...
==> default: Setting up x11proto-video-dev (2.3.2-1) ...
==> default: Setting up libxv-dev:amd64 (2:1.0.10-1) ...
==> default: Setting up libxvmc-dev:amd64 (2:1.0.8-1ubuntu1) ...
==> default: Setting up x11proto-xf86dga-dev (2.1-3) ...
==> default: Setting up libxxf86dga-dev:amd64 (2:1.1.4-1) ...
==> default: Setting up lksctp-tools (1.0.15+dfsg-1) ...
==> default: Setting up mysql-client (5.5.54-0ubuntu0.14.04.1) ...
==> default: Setting up policykit-1-gnome (0.105-1ubuntu4) ...
==> default: Setting up ps2eps (1.68-1build1) ...
==> default: Setting up python-cairo (1.8.8-1ubuntu5) ...
==> default: Setting up python3-pkg-resources (3.3-1ubuntu2) ...
==> default: Setting up python-chardet-whl (2.2.1-2~ubuntu1) ...
==> default: Setting up python-colorama (0.2.5-0.1ubuntu2) ...
==> default: Setting up python-colorama-whl (0.2.5-0.1ubuntu2) ...
==> default: Setting up python-dateutil (1.5+dfsg-1ubuntu1) ...
==> default: Setting up python2.7-dev (2.7.6-8ubuntu0.3) ...
==> default: Setting up python-dev (2.7.5-5ubuntu3) ...
==> default: Setting up python-distlib (0.1.8-1ubuntu1) ...
==> default: Setting up python-distlib-whl (0.1.8-1ubuntu1) ...
==> default: Setting up python-gobject-2 (2.28.6-12build1) ...
==> default: Setting up python-gtk2 (2.24.0-3ubuntu3) ...
==> default: Setting up python-glade2 (2.24.0-3ubuntu3) ...
==> default: Setting up python-html5lib (0.999-3~ubuntu1) ...
==> default: Setting up python-html5lib-whl (0.999-3~ubuntu1) ...
==> default: Setting up python-pil (2.3.0-1ubuntu3.3) ...
==> default: Setting up python-imaging (2.3.0-1ubuntu3.3) ...
==> default: Setting up python-libxml2 (2.9.1+dfsg1-3ubuntu4.8) ...
==> default: Setting up python-lxml (3.3.3-1ubuntu0.1) ...
==> default: Setting up python-matplotlib-data (1.3.1-1ubuntu5) ...
==> default: Setting up python-pyparsing (2.0.1+dfsg1-1build1) ...
==> default: Setting up python-tz (2012c-1ubuntu0.1) ...
==> default: Setting up python-numpy (1:1.8.2-0ubuntu0.1) ...
==> default: Setting up python-support (1.0.15) ...
==> default: Setting up python-matplotlib (1.3.1-1ubuntu5) ...
==> default: Setting up python-notify (0.1.1-3ubuntu2) ...
==> default: Setting up python-six-whl (1.5.2-1ubuntu1) ...
==> default: Setting up python-urllib3-whl (1.7.1-1ubuntu4) ...
==> default: Setting up python-requests-whl (2.2.1-1ubuntu0.3) ...
==> default: Setting up python-setuptools-whl (3.3-1ubuntu2) ...
==> default: Setting up python-pip-whl (1.5.4-1ubuntu4) ...
==> default: Setting up python-setuptools (3.3-1ubuntu2) ...
==> default: Setting up python-pip (1.5.4-1ubuntu4) ...
==> default: Setting up python-tk (2.7.5-1ubuntu1) ...
==> default: Setting up python-wheel (0.24.0-1~ubuntu1) ...
==> default: Setting up sinntp (1.5-1) ...
==> default: Setting up sloccount (2.26-5.1) ...
==> default: Setting up subversion (1.8.8-1ubuntu3.2) ...
==> default: Setting up tcl8.6 (8.6.1-4ubuntu1) ...
==> default: Setting up tcl (8.6.0+6ubuntu3) ...
==> default: Setting up tk8.6 (8.6.1-3ubuntu2) ...
==> default: Setting up tk (8.6.0+6ubuntu3) ...
==> default: Setting up x11-xserver-utils (7.7+2ubuntu1) ...
==> default: Setting up x11proto-bigreqs-dev (1:1.1.2-1) ...
==> default: Setting up x11proto-dri3-dev (1.0-1) ...
==> default: Setting up x11proto-present-dev (1.0-1) ...
==> default: Setting up x11proto-xcmisc-dev (1.2.2-1) ...
==> default: Setting up x11proto-xf86bigfont-dev (1.2.0-3) ...
==> default: Setting up x11proto-xf86dri-dev (2.1.1-2) ...
==> default: Setting up xbitmaps (1.1.1-2) ...
==> default: Setting up libpciaccess-dev:amd64 (0.13.2-1) ...
==> default: Setting up xsltproc (1.1.28-2build1) ...
==> default: Setting up xterm (297-1ubuntu1) ...
==> default: update-alternatives:
==> default: using /usr/bin/xterm to provide /usr/bin/x-terminal-emulator
(x-terminal-emulator) in auto mode
==> default: update-alternatives:
==> default: using /usr/bin/lxterm to provide /usr/bin/x-terminal-emulator
(x-terminal-emulator) in auto mode
==> default: Setting up libyaml-dev:amd64 (0.1.4-3ubuntu3.1) ...
==> default: Setting up nodejs (0.10.25~dfsg2-2ubuntu1) ...
==> default: update-alternatives:
==> default: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode
==> default: Setting up python-mock (1.0.1-3) ...
==> default: Processing triggers for tex-common (4.04) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Running updmap-sys. This may take some time...
==> default: done.
==> default: Running mktexlsr /var/lib/texmf ...
==> default: done.
==> default: Setting up lmodern (2.004.4-3) ...
==> default: Setting up tex-gyre (2.004.2-4) ...
==> default: Setting up texlive-latex-base (2013.20140215-1) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Building format(s) --all --cnffile
/etc/texmf/fmt.d/10texlive-latex-base.cnf.
==> default: This may take some time...
==> default: done.
==> default: Setting up texlive-generic-recommended (2013.20140215-1) ...
==> default: Setting up texlive-fonts-recommended (2013.20140215-1) ...
==> default: Setting up texlive-font-utils (2013.20140215-2) ...
==> default: Setting up texlive-fonts-recommended-doc (2013.20140215-1) ...
==> default: Setting up texlive-latex-base-doc (2013.20140215-1) ...
==> default: Setting up texlive-latex-recommended-doc (2013.20140215-1) ...
==> default: Setting up texlive-luatex (2013.20140215-1) ...
==> default: Setting up texlive-pstricks-doc (2013.20140215-2) ...
==> default: Processing triggers for tex-common (4.04) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Running updmap-sys. This may take some time...
==> default: done.
==> default: Running mktexlsr /var/lib/texmf ...
==> default: done.
==> default: Setting up texlive-latex-recommended (2013.20140215-1) ...
==> default: Setting up texlive-extra-utils (2013.20140215-2) ...
==> default: Setting up tipa (2:1.3-19) ...
==> default: Processing triggers for tex-common (4.04) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Running updmap-sys. This may take some time...
==> default: done.
==> default: Running mktexlsr /var/lib/texmf ...
==> default: done.
==> default: Setting up latex-xcolor (2.11-1.1) ...
==> default: Setting up texlive (2013.20140215-1) ...
==> default: Processing triggers for ureadahead (0.100.0-16) ...
==> default: Setting up mysql-server (5.5.54-0ubuntu0.14.04.1) ...
==> default: Processing triggers for tex-common (4.04) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Setting up pgf (2.10-1) ...
==> default: Processing triggers for tex-common (4.04) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Setting up texlive-pstricks (2013.20140215-2) ...
==> default: Setting up latex-beamer (3.24-1) ...
==> default: Processing triggers for dictionaries-common (1.20.5) ...
==> default: Setting up hunspell-en-us (20070829-4ubuntu3) ...
==> default: Processing triggers for tex-common (4.04) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Setting up prosper (1.00.4+cvs.2007.05.01-4) ...
==> default: Running mktexlsr. This may take some time...
==> default: done.
==> default: Setting up default-jre-headless (2:1.7-51) ...
==> default: Setting up default-jre (2:1.7-51) ...
==> default: Setting up gconf-service (3.2.6-0ubuntu2) ...
==> default: Setting up libgnome2-bin (2.32.1-4ubuntu1) ...
==> default: Setting up libmirclientplatform-mesa:amd64
(0.1.8+14.04.20140411-0ubuntu1) ...
==> default: update-alternatives:
==> default: using /usr/lib/x86_64-linux-gnu/mir/clientplatform/mesa/ld.so.conf
to provide /etc/ld.so.conf.d/x86_64-linux-gnu_mirclientplatform.conf
(x86_64-linux-gnu_mirclientplatform_conf) in auto mode
==> default: Setting up libmirclient7:amd64 (0.1.8+14.04.20140411-0ubuntu1) ...
==> default: Setting up libmirclient-dev:amd64 (0.1.8+14.04.20140411-0ubuntu1)
...
==> default: Setting up libegl1-mesa-dev (10.1.3-0ubuntu0.6) ...
==> default: Setting up libgconf2-4:amd64 (3.2.6-0ubuntu2) ...
==> default: Setting up libgles2-mesa-dev (10.1.3-0ubuntu0.6) ...
==> default: Setting up libpoppler-dev (0.24.5-2ubuntu4.4) ...
==> default: Setting up libpoppler-glib-dev (0.24.5-2ubuntu4.4) ...
==> default: Setting up xserver-xorg-dev (2:1.15.1-0ubuntu2.7) ...
==> default: Setting up xorg-dev (1:7.7+1ubuntu8.1) ...
==> default: Setting up libnss3-nssdb (2:3.26.2-0ubuntu0.14.04.3) ...
==> default: Setting up libnss3:amd64 (2:3.26.2-0ubuntu0.14.04.3) ...
==> default: Setting up ca-certificates-java (20130815ubuntu1) ...
==> default: Adding debian:Comodo_AAA_Services_root.pem
==> default: Adding debian:WellsSecure_Public_Root_Certificate_Authority.pem
==> default: Adding debian:ACCVRAIZ1.pem
==> default: Adding
debian:TÃRKTRUST_Elektronik_Sertifika_Hizmet_SaÄlayıcısı_H6.pem
==> default: Adding debian:QuoVadis_Root_CA_2.pem
==> default: Adding
debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
==> default: Adding debian:UTN_USERFirst_Hardware_Root_CA.pem
==> default: Adding debian:DigiCert_Assured_ID_Root_CA.pem
==> default: Adding debian:Starfield_Class_2_CA.pem
==> default: Adding debian:AffirmTrust_Networking.pem
==> default: Adding debian:DigiCert_Global_Root_CA.pem
==> default: Adding debian:ApplicationCA_-_Japanese_Government.pem
==> default: Adding debian:Certum_Trusted_Network_CA.pem
==> default: Adding debian:COMODO_Certification_Authority.pem
==> default: Adding debian:NetLock_Express_=Class_C=_Root.pem
==> default: Adding debian:UTN_USERFirst_Email_Root_CA.pem
==> default: Adding debian:XRamp_Global_CA_Root.pem
==> default: Adding debian:TC_TrustCenter_Class_3_CA_II.pem
==> default: Adding debian:GeoTrust_Global_CA.pem
==> default: Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
==> default: Adding debian:EC-ACC.pem
==> default: Adding debian:Camerfirma_Chambers_of_Commerce_Root.pem
==> default: Adding
debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G2.pem
==> default: Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
==> default: Adding debian:Global_Chambersign_Root_-_2008.pem
==> default: Adding debian:Root_CA_Generalitat_Valenciana.pem
==> default: Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
==> default: Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
==> default: Adding debian:GeoTrust_Primary_Certification_Authority.pem
==> default: Adding debian:NetLock_Business_=Class_B=_Root.pem
==> default: Adding debian:EE_Certification_Centre_Root_CA.pem
==> default: Adding
debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G2.pem
==> default: Adding debian:Equifax_Secure_eBusiness_CA_1.pem
==> default: Adding debian:QuoVadis_Root_CA_3_G3.pem
==> default: Adding
debian:Verisign_Class_3_Public_Primary_Certification_Authority.pem
==> default: Adding debian:EBG_Elektronik_Sertifika_Hizmet_SaÄlayıcısı.pem
==> default: Adding
debian:TÃBÄ°TAK_UEKAE_Kök_Sertifika_Hizmet_SaÄlayıcısı_-_Sürüm_3.pem
==> default: Adding debian:COMODO_RSA_Certification_Authority.pem
==> default: Adding debian:Comodo_Trusted_Services_root.pem
==> default: Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
==> default: Adding debian:StartCom_Certification_Authority_G2.pem
==> default: Adding
debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
==> default: Adding debian:Swisscom_Root_CA_1.pem
==> default: Adding
debian:TÃRKTRUST_Elektronik_Sertifika_Hizmet_SaÄlayıcısı_H5.pem
==> default: Adding debian:Certum_Root_CA.pem
==> default: Adding debian:Deutsche_Telekom_Root_CA_2.pem
==> default: Adding debian:CA_WoSign_ECC_Root.pem
==> default: Adding debian:Trustis_FPS_Root_CA.pem
==> default: Adding debian:Network_Solutions_Certificate_Authority.pem
==> default: Adding debian:Sonera_Class_2_Root_CA.pem
==> default: Adding debian:Baltimore_CyberTrust_Root.pem
==> default: Adding debian:TeliaSonera_Root_CA_v1.pem
==> default: Adding debian:QuoVadis_Root_CA.pem
==> default: Adding debian:Certinomis_-_Root_CA.pem
==> default: Adding debian:DST_ACES_CA_X6.pem
==> default: Adding debian:Certigna.pem
==> default: Adding debian:NetLock_Notary_=Class_A=_Root.pem
==> default: Adding debian:Equifax_Secure_Global_eBusiness_CA.pem
==> default: Adding debian:ePKI_Root_Certification_Authority.pem
==> default: Adding debian:NetLock_Qualified_=Class_QA=_Root.pem
==> default: Adding debian:QuoVadis_Root_CA_2_G3.pem
==> default: Adding debian:Atos_TrustedRoot_2011.pem
==> default: Adding debian:E-Tugra_Certification_Authority.pem
==> default: Adding debian:Visa_eCommerce_Root.pem
==> default: Adding debian:StartCom_Certification_Authority.pem
==> default: Adding debian:AffirmTrust_Premium.pem
==> default: Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
==> default: Adding debian:SwissSign_Silver_CA_-_G2.pem
==> default: Adding debian:GeoTrust_Universal_CA_2.pem
==> default: Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
==> default: Adding debian:Taiwan_GRCA.pem
==> default: Adding debian:CA_Disig_Root_R2.pem
==> default: Adding debian:Swisscom_Root_CA_2.pem
==> default: Adding debian:AddTrust_Qualified_Certificates_Root.pem
==> default: Adding debian:Certinomis_-_Autorité_Racine.pem
==> default: Adding debian:USERTrust_RSA_Certification_Authority.pem
==> default: Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
==> default: Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
==> default: Adding
debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
==> default: Adding debian:SwissSign_Platinum_CA_-_G2.pem
==> default: Adding debian:Security_Communication_EV_RootCA1.pem
==> default: Adding debian:CA_Disig.pem
==> default: Adding debian:thawte_Primary_Root_CA_-_G3.pem
==> default: Adding debian:Buypass_Class_2_Root_CA.pem
==> default: Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
==> default: Adding debian:GlobalSign_Root_CA.pem
==> default: Adding debian:DigiCert_Global_Root_G3.pem
==> default: Adding debian:DST_Root_CA_X3.pem
==> default: Adding
debian:S-TRUST_Authentication_and_Encryption_Root_CA_2005_PN.pem
==> default: Adding debian:AddTrust_External_Root.pem
==> default: Adding debian:USERTrust_ECC_Certification_Authority.pem
==> default: Adding debian:ComSign_CA.pem
==> default: Adding debian:Hongkong_Post_Root_CA_1.pem
==> default: Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
==> default: Adding debian:Equifax_Secure_CA.pem
==> default: Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
==> default: Adding debian:Juur-SK.pem
==> default: Adding debian:Security_Communication_Root_CA.pem
==> default: Adding debian:SecureSign_RootCA11.pem
==> default: Adding debian:GlobalSign_Root_CA_-_R2.pem
==> default: Adding debian:Actalis_Authentication_Root_CA.pem
==> default: Adding debian:RSA_Security_2048_v3.pem
==> default: Adding debian:thawte_Primary_Root_CA_-_G2.pem
==> default: Adding
debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G3.pem
==> default: Adding debian:WoSign_China.pem
==> default: Adding debian:Secure_Global_CA.pem
==> default: Adding debian:StartCom_Certification_Authority_2.pem
==> default: Adding debian:COMODO_ECC_Certification_Authority.pem
==> default: Adding debian:thawte_Primary_Root_CA.pem
==> default: Adding debian:CNNIC_ROOT.pem
==> default: Adding debian:Go_Daddy_Class_2_CA.pem
==> default: Adding debian:certSIGN_ROOT_CA.pem
==> default: Adding debian:AddTrust_Low-Value_Services_Root.pem
==> default: Adding debian:Microsec_e-Szigno_Root_CA.pem
==> default: Adding debian:Security_Communication_RootCA2.pem
==> default: Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
==> default: Adding debian:QuoVadis_Root_CA_3.pem
==> default: Adding debian:DigiCert_Assured_ID_Root_G2.pem
==> default: Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
==> default: Adding
debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G2.pem
==> default: Adding debian:QuoVadis_Root_CA_1_G3.pem
==> default: Adding debian:S-TRUST_Universal_Root_CA.pem
==> default: Adding debian:Certplus_Class_2_Primary_CA.pem
==> default: Adding
debian:China_Internet_Network_Information_Center_EV_Certificates_Root.pem
==> default: Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
==> default: Adding
debian:Verisign_Class_1_Public_Primary_Certification_Authority.pem
==> default: Adding debian:AffirmTrust_Premium_ECC.pem
==> default: Adding debian:NetLock_Arany_=Class_Gold=_FÅtanúsÃtvány.pem
==> default: Adding debian:Swisscom_Root_EV_CA_2.pem
==> default: Adding
debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
==> default: Adding debian:Buypass_Class_3_Root_CA.pem
==> default: Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
==> default: Adding debian:Chambers_of_Commerce_Root_-_2008.pem
==> default: Adding debian:WoSign.pem
==> default: Adding debian:PSCProcert.pem
==> default: Adding debian:GlobalSign_Root_CA_-_R3.pem
==> default: Adding debian:Staat_der_Nederlanden_Root_CA.pem
==> default: Adding
debian:Verisign_Class_3_Public_Primary_Certification_Authority_2.pem
==> default: Adding debian:AddTrust_Public_Services_Root.pem
==> default: Adding debian:Izenpe.com.pem
==> default: Adding debian:GeoTrust_Universal_CA.pem
==> default: Adding debian:CFCA_EV_ROOT.pem
==> default: Adding debian:Certification_Authority_of_WoSign_G2.pem
==> default: Adding
debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G3.pem
==> default: Adding debian:AC_RaÃz_Certicámara_S.A..pem
==> default: Adding debian:AffirmTrust_Commercial.pem
==> default: Adding debian:IGC_A.pem
==> default: Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2007.pem
==> default: Adding debian:Entrust_Root_Certification_Authority.pem
==> default: Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
==> default: Adding
debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
==> default: Adding debian:Cybertrust_Global_Root.pem
==> default: Adding debian:ACEDICOM_Root.pem
==> default: Adding debian:SecureTrust_CA.pem
==> default: Adding debian:IdenTrust_Commercial_Root_CA_1.pem
==> default: Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
==> default: Adding debian:DigiCert_Assured_ID_Root_G3.pem
==> default: Adding debian:CA_Disig_Root_R1.pem
==> default: Adding debian:Sonera_Class_1_Root_CA.pem
==> default: Adding debian:TWCA_Root_Certification_Authority.pem
==> default: Adding debian:Comodo_Secure_Services_root.pem
==> default: Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
==> default: Adding debian:DigiCert_Global_Root_G2.pem
==> default: Adding debian:TWCA_Global_Root_CA.pem
==> default: Adding debian:Camerfirma_Global_Chambersign_Root.pem
==> default: Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
==> default: Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
==> default: Adding debian:DigiCert_Trusted_Root_G4.pem
==> default: Adding
debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
==> default: Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
==> default: Adding debian:SwissSign_Gold_CA_-_G2.pem
==> default: Adding debian:Buypass_Class_2_CA_1.pem
==> default: Adding debian:GeoTrust_Global_CA_2.pem
==> default: done.
==> default: Setting up openjdk-7-jre-headless:amd64
(7u121-2.6.8-1ubuntu0.14.04.3) ...
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/java to provide
/usr/bin/java (java) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/keytool to provide
/usr/bin/keytool (keytool) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/pack200 to provide
/usr/bin/pack200 (pack200) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/rmid to provide
/usr/bin/rmid (rmid) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/rmiregistry to
provide /usr/bin/rmiregistry (rmiregistry) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/unpack200 to
provide /usr/bin/unpack200 (unpack200) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/orbd to provide
/usr/bin/orbd (orbd) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/servertool to
provide /usr/bin/servertool (servertool) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/tnameserv to
provide /usr/bin/tnameserv (tnameserv) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/lib/jexec to provide
/usr/bin/jexec (jexec) in auto mode
==> default: Setting up libatk-wrapper-java (0.30.4-4) ...
==> default: Setting up libatk-wrapper-java-jni:amd64 (0.30.4-4) ...
==> default: Setting up openjdk-7-jre:amd64 (7u121-2.6.8-1ubuntu0.14.04.3) ...
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/policytool to
provide /usr/bin/policytool (policytool) in auto mode
==> default: Setting up gconf-service-backend (3.2.6-0ubuntu2) ...
==> default: Setting up gconf2 (3.2.6-0ubuntu2) ...
==> default: update-alternatives:
==> default: using /usr/bin/gconftool-2 to provide /usr/bin/gconftool
(gconftool) in auto mode
==> default:
==> default: (gconftool-2:27494): GConf-WARNING **: Client failed to connect to
the D-BUS daemon:
==> default: Unable to autolaunch a dbus-daemon without a $DISPLAY for X11
==> default: Setting up libgnomevfs2-common (1:2.24.4-1ubuntu6) ...
==> default: Setting up libgnomevfs2-0:amd64 (1:2.24.4-1ubuntu6) ...
==> default: Setting up libgnome2-common (2.32.1-4ubuntu1) ...
==> default: Setting up libgnome2-0:amd64 (2.32.1-4ubuntu1) ...
==> default: Setting up openjdk-7-jdk:amd64 (7u121-2.6.8-1ubuntu0.14.04.3) ...
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/appletviewer to
provide /usr/bin/appletviewer (appletviewer) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/extcheck to provide
/usr/bin/extcheck (extcheck) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/idlj to provide
/usr/bin/idlj (idlj) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jar to provide
/usr/bin/jar (jar) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jarsigner to provide
/usr/bin/jarsigner (jarsigner) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/javac to provide
/usr/bin/javac (javac) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/javadoc to provide
/usr/bin/javadoc (javadoc) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/javah to provide
/usr/bin/javah (javah) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/javap to provide
/usr/bin/javap (javap) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jcmd to provide
/usr/bin/jcmd (jcmd) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jconsole to provide
/usr/bin/jconsole (jconsole) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jdb to provide
/usr/bin/jdb (jdb) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jhat to provide
/usr/bin/jhat (jhat) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jinfo to provide
/usr/bin/jinfo (jinfo) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jmap to provide
/usr/bin/jmap (jmap) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jps to provide
/usr/bin/jps (jps) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jrunscript to provide
/usr/bin/jrunscript (jrunscript) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jsadebugd to provide
/usr/bin/jsadebugd (jsadebugd) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jstack to provide
/usr/bin/jstack (jstack) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jstat to provide
/usr/bin/jstat (jstat) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jstatd to provide
/usr/bin/jstatd (jstatd) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/native2ascii to
provide /usr/bin/native2ascii (native2ascii) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/rmic to provide
/usr/bin/rmic (rmic) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/schemagen to provide
/usr/bin/schemagen (schemagen) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/serialver to provide
/usr/bin/serialver (serialver) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/wsgen to provide
/usr/bin/wsgen (wsgen) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/wsimport to provide
/usr/bin/wsimport (wsimport) in auto mode
==> default: update-alternatives:
==> default: using /usr/lib/jvm/java-7-openjdk-amd64/bin/xjc to provide
/usr/bin/xjc (xjc) in auto mode
==> default: Setting up default-jdk (2:1.7-51) ...
==> default: Setting up libpoppler-private-dev (0.24.5-2ubuntu4.4) ...
==> default: Processing triggers for libc-bin (2.19-0ubuntu6.9) ...
==> default: Processing triggers for python-support (1.0.15) ...
==> default: Processing triggers for ca-certificates (20160104ubuntu0.14.04.1)
...
==> default: Updating certificates in /etc/ssl/certs...
==> default: 0 added, 0 removed; done.
==> default: Running hooks in /etc/ca-certificates/update.d....
==> default: done.
==> default: done.
==> default: nodejs is /usr/bin/nodejs
==> default: ln:
==> default: failed to create symbolic link â/usr/bin/nodejsâ
==> default: : File exists
==> default: Providing R libraries
==> default:
Extracting templates from packages: 36%
==> default:
Extracting templates from packages: 72%
==> default:
Extracting templates from packages: 100%
==> default: Selecting previously unselected package libcroco3:amd64.
==> default: (Reading database ... 94213 files and directories currently
installed.)
==> default: Preparing to unpack .../libcroco3_0.6.8-2ubuntu1_amd64.deb ...
==> default: Unpacking libcroco3:amd64 (0.6.8-2ubuntu1) ...
==> default: Selecting previously unselected package libunistring0:amd64.
==> default: Preparing to unpack .../libunistring0_0.9.3-5ubuntu3_amd64.deb ...
==> default: Unpacking libunistring0:amd64 (0.9.3-5ubuntu3) ...
==> default: Selecting previously unselected package libgettextpo0:amd64.
==> default: Preparing to unpack .../libgettextpo0_0.18.3.1-1ubuntu3_amd64.deb
...
==> default: Unpacking libgettextpo0:amd64 (0.18.3.1-1ubuntu3) ...
==> default: Selecting previously unselected package m4.
==> default: Preparing to unpack .../m4_1.4.17-2ubuntu1_amd64.deb ...
==> default: Unpacking m4 (1.4.17-2ubuntu1) ...
==> default: Selecting previously unselected package autoconf.
==> default: Preparing to unpack .../autoconf_2.69-6_all.deb ...
==> default: Unpacking autoconf (2.69-6) ...
==> default: Selecting previously unselected package automake.
==> default: Preparing to unpack .../automake_1%3a1.14.1-2ubuntu1_all.deb ...
==> default: Unpacking automake (1:1.14.1-2ubuntu1) ...
==> default: Selecting previously unselected package gettext.
==> default: Preparing to unpack .../gettext_0.18.3.1-1ubuntu3_amd64.deb ...
==> default: Unpacking gettext (0.18.3.1-1ubuntu3) ...
==> default: Selecting previously unselected package intltool-debian.
==> default: Preparing to unpack .../intltool-debian_0.35.0+20060710.1_all.deb
...
==> default: Unpacking intltool-debian (0.35.0+20060710.1) ...
==> default: Selecting previously unselected package po-debconf.
==> default: Preparing to unpack .../po-debconf_1.0.16+nmu2ubuntu1_all.deb ...
==> default: Unpacking po-debconf (1.0.16+nmu2ubuntu1) ...
==> default: Selecting previously unselected package dh-apparmor.
==> default: Preparing to unpack
.../dh-apparmor_2.10.95-0ubuntu2.5~14.04.1_all.deb ...
==> default: Unpacking dh-apparmor (2.10.95-0ubuntu2.5~14.04.1) ...
==> default: Selecting previously unselected package debhelper.
==> default: Preparing to unpack .../debhelper_9.20131227ubuntu1_all.deb ...
==> default: Unpacking debhelper (9.20131227ubuntu1) ...
==> default: Selecting previously unselected package liburi-perl.
==> default: Preparing to unpack .../liburi-perl_1.60-1_all.deb ...
==> default: Unpacking liburi-perl (1.60-1) ...
==> default: Selecting previously unselected package libencode-locale-perl.
==> default: Preparing to unpack .../libencode-locale-perl_1.03-1_all.deb ...
==> default: Unpacking libencode-locale-perl (1.03-1) ...
==> default: Selecting previously unselected package libhttp-date-perl.
==> default: Preparing to unpack .../libhttp-date-perl_6.02-1_all.deb ...
==> default: Unpacking libhttp-date-perl (6.02-1) ...
==> default: Selecting previously unselected package libfile-listing-perl.
==> default: Preparing to unpack .../libfile-listing-perl_6.04-1_all.deb ...
==> default: Unpacking libfile-listing-perl (6.04-1) ...
==> default: Selecting previously unselected package libhtml-tagset-perl.
==> default: Preparing to unpack .../libhtml-tagset-perl_3.20-2_all.deb ...
==> default: Unpacking libhtml-tagset-perl (3.20-2) ...
==> default: Selecting previously unselected package libhtml-parser-perl.
==> default: Preparing to unpack .../libhtml-parser-perl_3.71-1build1_amd64.deb
...
==> default: Unpacking libhtml-parser-perl (3.71-1build1) ...
==> default: Selecting previously unselected package libhtml-tree-perl.
==> default: Preparing to unpack .../libhtml-tree-perl_5.03-1_all.deb ...
==> default: Unpacking libhtml-tree-perl (5.03-1) ...
==> default: Selecting previously unselected package libio-html-perl.
==> default: Preparing to unpack .../libio-html-perl_1.00-1_all.deb ...
==> default: Unpacking libio-html-perl (1.00-1) ...
==> default: Selecting previously unselected package liblwp-mediatypes-perl.
==> default: Preparing to unpack .../liblwp-mediatypes-perl_6.02-1_all.deb ...
==> default: Unpacking liblwp-mediatypes-perl (6.02-1) ...
==> default: Selecting previously unselected package libhttp-message-perl.
==> default: Preparing to unpack .../libhttp-message-perl_6.06-1_all.deb ...
==> default: Unpacking libhttp-message-perl (6.06-1) ...
==> default: Selecting previously unselected package libhttp-cookies-perl.
==> default: Preparing to unpack .../libhttp-cookies-perl_6.00-2_all.deb ...
==> default: Unpacking libhttp-cookies-perl (6.00-2) ...
==> default: Selecting previously unselected package libhttp-negotiate-perl.
==> default: Preparing to unpack .../libhttp-negotiate-perl_6.00-2_all.deb ...
==> default: Unpacking libhttp-negotiate-perl (6.00-2) ...
==> default: Selecting previously unselected package libnet-ssleay-perl.
==> default: Preparing to unpack .../libnet-ssleay-perl_1.58-1_amd64.deb ...
==> default: Unpacking libnet-ssleay-perl (1.58-1) ...
==> default: Selecting previously unselected package libio-socket-ssl-perl.
==> default: Preparing to unpack
.../libio-socket-ssl-perl_1.965-1ubuntu1_all.deb ...
==> default: Unpacking libio-socket-ssl-perl (1.965-1ubuntu1) ...
==> default: Selecting previously unselected package libnet-http-perl.
==> default: Preparing to unpack .../libnet-http-perl_6.06-1_all.deb ...
==> default: Unpacking libnet-http-perl (6.06-1) ...
==> default: Selecting previously unselected package liblwp-protocol-https-perl.
==> default: Preparing to unpack
.../liblwp-protocol-https-perl_6.04-2ubuntu0.1_all.deb ...
==> default: Unpacking liblwp-protocol-https-perl (6.04-2ubuntu0.1) ...
==> default: Selecting previously unselected package libwww-robotrules-perl.
==> default: Preparing to unpack .../libwww-robotrules-perl_6.01-1_all.deb ...
==> default: Unpacking libwww-robotrules-perl (6.01-1) ...
==> default: Selecting previously unselected package libwww-perl.
==> default: Preparing to unpack .../libwww-perl_6.05-2_all.deb ...
==> default: Unpacking libwww-perl (6.05-2) ...
==> default: Selecting previously unselected package libxml-parser-perl.
==> default: Preparing to unpack .../libxml-parser-perl_2.41-1build3_amd64.deb
...
==> default: Unpacking libxml-parser-perl (2.41-1build3) ...
==> default: Selecting previously unselected package intltool.
==> default: Preparing to unpack .../intltool_0.50.2-2_all.deb ...
==> default: Unpacking intltool (0.50.2-2) ...
==> default: Selecting previously unselected package dh-translations.
==> default: Preparing to unpack .../dh-translations_121_all.deb ...
==> default: Unpacking dh-translations (121) ...
==> default: Selecting previously unselected package python-scour.
==> default: Preparing to unpack .../python-scour_0.26-3build1_all.deb ...
==> default: Unpacking python-scour (0.26-3build1) ...
==> default: Selecting previously unselected package cdbs.
==> default: Preparing to unpack .../cdbs_0.4.122ubuntu2_all.deb ...
==> default: Unpacking cdbs (0.4.122ubuntu2) ...
==> default: Selecting previously unselected package icu-devtools.
==> default: Preparing to unpack .../icu-devtools_52.1-3ubuntu0.4_amd64.deb ...
==> default: Unpacking icu-devtools (52.1-3ubuntu0.4) ...
==> default: Selecting previously unselected package libasprintf-dev:amd64.
==> default: Preparing to unpack
.../libasprintf-dev_0.18.3.1-1ubuntu3_amd64.deb ...
==> default: Unpacking libasprintf-dev:amd64 (0.18.3.1-1ubuntu3) ...
==> default: Selecting previously unselected package libblas-dev.
==> default: Preparing to unpack .../libblas-dev_1.2.20110419-7_amd64.deb ...
==> default: Unpacking libblas-dev (1.2.20110419-7) ...
==> default: Selecting previously unselected package libbz2-dev:amd64.
==> default: Preparing to unpack .../libbz2-dev_1.0.6-5_amd64.deb ...
==> default: Unpacking libbz2-dev:amd64 (1.0.6-5) ...
==> default: Selecting previously unselected package libfont-afm-perl.
==> default: Preparing to unpack .../libfont-afm-perl_1.20-1_all.deb ...
==> default: Unpacking libfont-afm-perl (1.20-1) ...
==> default: Selecting previously unselected package libgettextpo-dev:amd64.
==> default: Preparing to unpack
.../libgettextpo-dev_0.18.3.1-1ubuntu3_amd64.deb ...
==> default: Unpacking libgettextpo-dev:amd64 (0.18.3.1-1ubuntu3) ...
==> default: Selecting previously unselected package libhtml-form-perl.
==> default: Preparing to unpack .../libhtml-form-perl_6.03-1_all.deb ...
==> default: Unpacking libhtml-form-perl (6.03-1) ...
==> default: Selecting previously unselected package libhtml-format-perl.
==> default: Preparing to unpack .../libhtml-format-perl_2.11-1_all.deb ...
==> default: Unpacking libhtml-format-perl (2.11-1) ...
==> default: Selecting previously unselected package libhttp-daemon-perl.
==> default: Preparing to unpack .../libhttp-daemon-perl_6.01-1_all.deb ...
==> default: Unpacking libhttp-daemon-perl (6.01-1) ...
==> default: Selecting previously unselected package libicu-dev:amd64.
==> default: Preparing to unpack .../libicu-dev_52.1-3ubuntu0.4_amd64.deb ...
==> default: Unpacking libicu-dev:amd64 (52.1-3ubuntu0.4) ...
==> default: Selecting previously unselected package libsocket6-perl.
==> default: Preparing to unpack .../libsocket6-perl_0.25-1_amd64.deb ...
==> default: Unpacking libsocket6-perl (0.25-1) ...
==> default: Selecting previously unselected package libio-socket-inet6-perl.
==> default: Preparing to unpack .../libio-socket-inet6-perl_2.71-1_all.deb ...
==> default: Unpacking libio-socket-inet6-perl (2.71-1) ...
==> default: Selecting previously unselected package libjpeg-turbo8-dev:amd64.
==> default: Preparing to unpack
.../libjpeg-turbo8-dev_1.3.0-0ubuntu2_amd64.deb ...
==> default: Unpacking libjpeg-turbo8-dev:amd64 (1.3.0-0ubuntu2) ...
==> default: Selecting previously unselected package libjpeg8-dev:amd64.
==> default: Preparing to unpack .../libjpeg8-dev_8c-2ubuntu8_amd64.deb ...
==> default: Unpacking libjpeg8-dev:amd64 (8c-2ubuntu8) ...
==> default: Selecting previously unselected package libjpeg-dev:amd64.
==> default: Preparing to unpack .../libjpeg-dev_8c-2ubuntu8_amd64.deb ...
==> default: Unpacking libjpeg-dev:amd64 (8c-2ubuntu8) ...
==> default: Selecting previously unselected package liblapack-dev.
==> default: Preparing to unpack .../liblapack-dev_3.5.0-2ubuntu1_amd64.deb ...
==> default: Unpacking liblapack-dev (3.5.0-2ubuntu1) ...
==> default: Selecting previously unselected package libsys-hostname-long-perl.
==> default: Preparing to unpack .../libsys-hostname-long-perl_1.4-3_all.deb ...
==> default: Unpacking libsys-hostname-long-perl (1.4-3) ...
==> default: Selecting previously unselected package libmail-sendmail-perl.
==> default: Preparing to unpack .../libmail-sendmail-perl_0.79.16-1_all.deb ...
==> default: Unpacking libmail-sendmail-perl (0.79.16-1) ...
==> default: Selecting previously unselected package libnet-smtp-ssl-perl.
==> default: Preparing to unpack .../libnet-smtp-ssl-perl_1.01-3_all.deb ...
==> default: Unpacking libnet-smtp-ssl-perl (1.01-3) ...
==> default: Selecting previously unselected package libmailtools-perl.
==> default: Preparing to unpack .../libmailtools-perl_2.12-1_all.deb ...
==> default: Unpacking libmailtools-perl (2.12-1) ...
==> default: Selecting previously unselected package libtinfo-dev:amd64.
==> default: Preparing to unpack
.../libtinfo-dev_5.9+20140118-1ubuntu1_amd64.deb ...
==> default: Unpacking libtinfo-dev:amd64 (5.9+20140118-1ubuntu1) ...
==> default: Selecting previously unselected package libncurses5-dev:amd64.
==> default: Preparing to unpack
.../libncurses5-dev_5.9+20140118-1ubuntu1_amd64.deb ...
==> default: Unpacking libncurses5-dev:amd64 (5.9+20140118-1ubuntu1) ...
==> default: Selecting previously unselected package libreadline6-dev:amd64.
==> default: Preparing to unpack .../libreadline6-dev_6.3-4ubuntu2_amd64.deb ...
==> default: Unpacking libreadline6-dev:amd64 (6.3-4ubuntu2) ...
==> default: Selecting previously unselected package libreadline-dev:amd64.
==> default: Preparing to unpack .../libreadline-dev_6.3-4ubuntu2_amd64.deb ...
==> default: Unpacking libreadline-dev:amd64 (6.3-4ubuntu2) ...
==> default: Selecting previously unselected package zip.
==> default: Preparing to unpack .../archives/zip_3.0-8_amd64.deb ...
==> default: Unpacking zip (3.0-8) ...
==> default: Selecting previously unselected package unzip.
==> default: Preparing to unpack .../unzip_6.0-9ubuntu1.5_amd64.deb ...
==> default: Unpacking unzip (6.0-9ubuntu1.5) ...
==> default: Selecting previously unselected package r-base-core.
==> default: Preparing to unpack .../r-base-core_3.3.2-1trusty0_amd64.deb ...
==> default: Unpacking r-base-core (3.3.2-1trusty0) ...
==> default: Selecting previously unselected package r-cran-boot.
==> default: Preparing to unpack .../r-cran-boot_1.3-17-1trusty0_all.deb ...
==> default: Unpacking r-cran-boot (1.3-17-1trusty0) ...
==> default: Selecting previously unselected package r-cran-cluster.
==> default: Preparing to unpack .../r-cran-cluster_2.0.5-1trusty0_amd64.deb ...
==> default: Unpacking r-cran-cluster (2.0.5-1trusty0) ...
==> default: Selecting previously unselected package r-cran-foreign.
==> default: Preparing to unpack .../r-cran-foreign_0.8.67-1trusty0_amd64.deb
...
==> default: Unpacking r-cran-foreign (0.8.67-1trusty0) ...
==> default: Selecting previously unselected package r-cran-mass.
==> default: Preparing to unpack .../r-cran-mass_7.3-44-1trusty0_amd64.deb ...
==> default: Unpacking r-cran-mass (7.3-44-1trusty0) ...
==> default: Selecting previously unselected package r-cran-kernsmooth.
==> default: Preparing to unpack
.../r-cran-kernsmooth_2.23-15-2trusty0_amd64.deb ...
==> default: Unpacking r-cran-kernsmooth (2.23-15-2trusty0) ...
==> default: Selecting previously unselected package r-cran-lattice.
==> default: Preparing to unpack .../r-cran-lattice_0.20-34-1trusty0_amd64.deb
...
==> default: Unpacking r-cran-lattice (0.20-34-1trusty0) ...
==> default: Selecting previously unselected package r-cran-nlme.
==> default: Preparing to unpack .../r-cran-nlme_3.1.131-2trusty0_amd64.deb ...
==> default: Unpacking r-cran-nlme (3.1.131-2trusty0) ...
==> default: Selecting previously unselected package r-cran-matrix.
==> default: Preparing to unpack .../r-cran-matrix_1.2-8-1trusty0_amd64.deb ...
==> default: Unpacking r-cran-matrix (1.2-8-1trusty0) ...
==> default: Selecting previously unselected package r-cran-mgcv.
==> default: Preparing to unpack .../r-cran-mgcv_1.8-16-1cran1trusty0_amd64.deb
...
==> default: Unpacking r-cran-mgcv (1.8-16-1cran1trusty0) ...
==> default: Selecting previously unselected package r-cran-survival.
==> default: Preparing to unpack .../r-cran-survival_2.39-4-2trusty0_amd64.deb
...
==> default: Unpacking r-cran-survival (2.39-4-2trusty0) ...
==> default: Selecting previously unselected package r-cran-rpart.
==> default: Preparing to unpack .../r-cran-rpart_4.1-10-1trusty0_amd64.deb ...
==> default: Unpacking r-cran-rpart (4.1-10-1trusty0) ...
==> default: Selecting previously unselected package r-cran-class.
==> default: Preparing to unpack .../r-cran-class_7.3-14-1trusty0_amd64.deb ...
==> default: Unpacking r-cran-class (7.3-14-1trusty0) ...
==> default: Selecting previously unselected package r-cran-nnet.
==> default: Preparing to unpack .../r-cran-nnet_7.3-12-1trusty0_amd64.deb ...
==> default: Unpacking r-cran-nnet (7.3-12-1trusty0) ...
==> default: Selecting previously unselected package r-cran-spatial.
==> default: Preparing to unpack .../r-cran-spatial_7.3-10-1trusty0_amd64.deb
...
==> default: Unpacking r-cran-spatial (7.3-10-1trusty0) ...
==> default: Selecting previously unselected package r-cran-codetools.
==> default: Preparing to unpack
.../r-cran-codetools_0.2-15-1cran1trusty0_all.deb ...
==> default: Unpacking r-cran-codetools (0.2-15-1cran1trusty0) ...
==> default: Selecting previously unselected package r-recommended.
==> default: Preparing to unpack .../r-recommended_3.3.2-1trusty0_all.deb ...
==> default: Unpacking r-recommended (3.3.2-1trusty0) ...
==> default: Selecting previously unselected package r-base.
==> default: Preparing to unpack .../r-base_3.3.2-1trusty0_all.deb ...
==> default: Unpacking r-base (3.3.2-1trusty0) ...
==> default: Selecting previously unselected package liblzma-dev:amd64.
==> default: Preparing to unpack
.../liblzma-dev_5.1.1alpha+20120614-2ubuntu2_amd64.deb ...
==> default: Unpacking liblzma-dev:amd64 (5.1.1alpha+20120614-2ubuntu2) ...
==> default: Selecting previously unselected package r-base-dev.
==> default: Preparing to unpack .../r-base-dev_3.3.2-1trusty0_all.deb ...
==> default: Unpacking r-base-dev (3.3.2-1trusty0) ...
==> default: Selecting previously unselected package r-doc-html.
==> default: Preparing to unpack .../r-doc-html_3.3.2-1trusty0_all.deb ...
==> default: Unpacking r-doc-html (3.3.2-1trusty0) ...
==> default: Selecting previously unselected package libauthen-sasl-perl.
==> default: Preparing to unpack .../libauthen-sasl-perl_2.1500-1_all.deb ...
==> default: Unpacking libauthen-sasl-perl (2.1500-1) ...
==> default: Selecting previously unselected package r-base-html.
==> default: Preparing to unpack .../r-base-html_3.3.2-1trusty0_all.deb ...
==> default: Unpacking r-base-html (3.3.2-1trusty0) ...
==> default: Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
==> default: Processing triggers for install-info (5.2.0.dfsg.1-2) ...
==> default: Processing triggers for mime-support (3.54ubuntu1.1) ...
==> default: Processing triggers for hicolor-icon-theme (0.13-1) ...
==> default: Processing triggers for desktop-file-utils (0.22-1ubuntu1) ...
==> default: Setting up libcroco3:amd64 (0.6.8-2ubuntu1) ...
==> default: Setting up libunistring0:amd64 (0.9.3-5ubuntu3) ...
==> default: Setting up libgettextpo0:amd64 (0.18.3.1-1ubuntu3) ...
==> default: Setting up m4 (1.4.17-2ubuntu1) ...
==> default: Setting up autoconf (2.69-6) ...
==> default: Setting up automake (1:1.14.1-2ubuntu1) ...
==> default: update-alternatives:
==> default: using /usr/bin/automake-1.14 to provide /usr/bin/automake
(automake) in auto mode
==> default: Setting up gettext (0.18.3.1-1ubuntu3) ...
==> default: Setting up intltool-debian (0.35.0+20060710.1) ...
==> default: Setting up po-debconf (1.0.16+nmu2ubuntu1) ...
==> default: Setting up dh-apparmor (2.10.95-0ubuntu2.5~14.04.1) ...
==> default: Setting up debhelper (9.20131227ubuntu1) ...
==> default: Setting up liburi-perl (1.60-1) ...
==> default: Setting up libencode-locale-perl (1.03-1) ...
==> default: Setting up libhttp-date-perl (6.02-1) ...
==> default: Setting up libfile-listing-perl (6.04-1) ...
==> default: Setting up libhtml-tagset-perl (3.20-2) ...
==> default: Setting up libhtml-parser-perl (3.71-1build1) ...
==> default: Setting up libhtml-tree-perl (5.03-1) ...
==> default: Setting up libio-html-perl (1.00-1) ...
==> default: Setting up liblwp-mediatypes-perl (6.02-1) ...
==> default: Setting up libhttp-message-perl (6.06-1) ...
==> default: Setting up libhttp-cookies-perl (6.00-2) ...
==> default: Setting up libhttp-negotiate-perl (6.00-2) ...
==> default: Setting up libnet-ssleay-perl (1.58-1) ...
==> default: Setting up libio-socket-ssl-perl (1.965-1ubuntu1) ...
==> default: Setting up libnet-http-perl (6.06-1) ...
==> default: Setting up libwww-robotrules-perl (6.01-1) ...
==> default: Setting up python-scour (0.26-3build1) ...
==> default: Setting up icu-devtools (52.1-3ubuntu0.4) ...
==> default: Setting up libasprintf-dev:amd64 (0.18.3.1-1ubuntu3) ...
==> default: Setting up libblas-dev (1.2.20110419-7) ...
==> default: update-alternatives:
==> default: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so
(libblas.so) in auto mode
==> default: Setting up libbz2-dev:amd64 (1.0.6-5) ...
==> default: Setting up libfont-afm-perl (1.20-1) ...
==> default: Setting up libgettextpo-dev:amd64 (0.18.3.1-1ubuntu3) ...
==> default: Setting up libhtml-form-perl (6.03-1) ...
==> default: Setting up libhtml-format-perl (2.11-1) ...
==> default: Setting up libhttp-daemon-perl (6.01-1) ...
==> default: Setting up libicu-dev:amd64 (52.1-3ubuntu0.4) ...
==> default: Setting up libsocket6-perl (0.25-1) ...
==> default: Setting up libio-socket-inet6-perl (2.71-1) ...
==> default: Setting up libjpeg-turbo8-dev:amd64 (1.3.0-0ubuntu2) ...
==> default: Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ...
==> default: Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ...
==> default: Setting up liblapack-dev (3.5.0-2ubuntu1) ...
==> default: update-alternatives:
==> default: using /usr/lib/lapack/liblapack.so to provide
/usr/lib/liblapack.so (liblapack.so) in auto mode
==> default: Setting up libsys-hostname-long-perl (1.4-3) ...
==> default: Setting up libmail-sendmail-perl (0.79.16-1) ...
==> default: Setting up libnet-smtp-ssl-perl (1.01-3) ...
==> default: Setting up libmailtools-perl (2.12-1) ...
==> default: Setting up libtinfo-dev:amd64 (5.9+20140118-1ubuntu1) ...
==> default: Setting up libncurses5-dev:amd64 (5.9+20140118-1ubuntu1) ...
==> default: Setting up libreadline6-dev:amd64 (6.3-4ubuntu2) ...
==> default: Setting up libreadline-dev:amd64 (6.3-4ubuntu2) ...
==> default: Setting up zip (3.0-8) ...
==> default: Setting up unzip (6.0-9ubuntu1.5) ...
==> default: Setting up r-base-core (3.3.2-1trusty0) ...
==> default: Creating config file /etc/R/Renviron with new version
==> default: Setting up r-cran-boot (1.3-17-1trusty0) ...
==> default: Setting up r-cran-cluster (2.0.5-1trusty0) ...
==> default: Setting up r-cran-foreign (0.8.67-1trusty0) ...
==> default: Setting up r-cran-mass (7.3-44-1trusty0) ...
==> default: Setting up r-cran-kernsmooth (2.23-15-2trusty0) ...
==> default: Setting up r-cran-lattice (0.20-34-1trusty0) ...
==> default: Setting up r-cran-nlme (3.1.131-2trusty0) ...
==> default: Setting up r-cran-matrix (1.2-8-1trusty0) ...
==> default: Setting up r-cran-mgcv (1.8-16-1cran1trusty0) ...
==> default: Setting up r-cran-survival (2.39-4-2trusty0) ...
==> default: Setting up r-cran-rpart (4.1-10-1trusty0) ...
==> default: Setting up r-cran-class (7.3-14-1trusty0) ...
==> default: Setting up r-cran-nnet (7.3-12-1trusty0) ...
==> default: Setting up r-cran-spatial (7.3-10-1trusty0) ...
==> default: Setting up r-cran-codetools (0.2-15-1cran1trusty0) ...
==> default: Setting up r-recommended (3.3.2-1trusty0) ...
==> default: Setting up r-base (3.3.2-1trusty0) ...
==> default: Setting up liblzma-dev:amd64 (5.1.1alpha+20120614-2ubuntu2) ...
==> default: Setting up r-doc-html (3.3.2-1trusty0) ...
==> default: Setting up libauthen-sasl-perl (2.1500-1) ...
==> default: Setting up r-base-html (3.3.2-1trusty0) ...
==> default: Setting up liblwp-protocol-https-perl (6.04-2ubuntu0.1) ...
==> default: Setting up libwww-perl (6.05-2) ...
==> default: Setting up libxml-parser-perl (2.41-1build3) ...
==> default: Setting up intltool (0.50.2-2) ...
==> default: Setting up dh-translations (121) ...
==> default: Setting up cdbs (0.4.122ubuntu2) ...
==> default: Setting up r-base-dev (3.3.2-1trusty0) ...
==> default: Processing triggers for libc-bin (2.19-0ubuntu6.9) ...
==> default: Java interpreter : /usr/lib/jvm/default-java/jre/bin/java
==> default: Java version : 1.7.0_121
==> default: Java home path : /usr/lib/jvm/default-java
==> default: Java compiler : /usr/lib/jvm/default-java/bin/javac
==> default: Java headers gen.: /usr/lib/jvm/default-java/bin/javah
==> default: Java archive tool: /usr/lib/jvm/default-java/bin/jar
==> default: trying to compile and link a JNI program
==> default: detected JNI cpp flags : -I$(JAVA_HOME)/include
==> default: detected JNI linker flags :
-L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG
-I/usr/lib/jvm/default-java/include -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c conftest.c -o conftest.o
==> default: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions
-Wl,-z,relro -o conftest.so conftest.o
-L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm -L/usr/lib/R/lib
-lR
==> default: JAVA_HOME : /usr/lib/jvm/default-java
==> default: Java library path:
/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server
==> default: JNI cpp flags : -I$(JAVA_HOME)/include
==> default: JNI linker flags :
-L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm
==> default: Updating Java configuration in /usr/lib/R
==> default: Done.
==> default: Selecting previously unselected package libcurl3-nss:amd64.
==> default: (Reading database ... 98700 files and directories currently
installed.)
==> default: Preparing to unpack .../libcurl3-nss_7.35.0-1ubuntu2.10_amd64.deb
...
==> default: Unpacking libcurl3-nss:amd64 (7.35.0-1ubuntu2.10) ...
==> default: Selecting previously unselected package libssh2-1:amd64.
==> default: Preparing to unpack .../libssh2-1_1.4.3-2ubuntu0.1_amd64.deb ...
==> default: Unpacking libssh2-1:amd64 (1.4.3-2ubuntu0.1) ...
==> default: Selecting previously unselected package libssh2-1-dev:amd64.
==> default: Preparing to unpack .../libssh2-1-dev_1.4.3-2ubuntu0.1_amd64.deb
...
==> default: Unpacking libssh2-1-dev:amd64 (1.4.3-2ubuntu0.1) ...
==> default: Selecting previously unselected package r-cran-littler.
==> default: Preparing to unpack .../r-cran-littler_0.3.2-1trusty0_amd64.deb ...
==> default: Unpacking r-cran-littler (0.3.2-1trusty0) ...
==> default: Selecting previously unselected package littler.
==> default: Preparing to unpack .../littler_0.3.2-1trusty0_all.deb ...
==> default: Unpacking littler (0.3.2-1trusty0) ...
==> default: Selecting previously unselected package r-cran-bitops.
==> default: Preparing to unpack .../r-cran-bitops_1.0-6-1_amd64.deb ...
==> default: Unpacking r-cran-bitops (1.0-6-1) ...
==> default: Selecting previously unselected package r-cran-colorspace.
==> default: Preparing to unpack .../r-cran-colorspace_1.2-2-1_amd64.deb ...
==> default: Unpacking r-cran-colorspace (1.2-2-1) ...
==> default: Selecting previously unselected package r-cran-dbi.
==> default: Preparing to unpack .../r-cran-dbi_0.2-7-1_amd64.deb ...
==> default: Unpacking r-cran-dbi (0.2-7-1) ...
==> default: Selecting previously unselected package r-cran-dichromat.
==> default: Preparing to unpack .../r-cran-dichromat_2.0.0-2_all.deb ...
==> default: Unpacking r-cran-dichromat (2.0.0-2) ...
==> default: Selecting previously unselected package r-cran-digest.
==> default: Preparing to unpack .../r-cran-digest_0.6.4-1_amd64.deb ...
==> default: Unpacking r-cran-digest (0.6.4-1) ...
==> default: Selecting previously unselected package r-cran-plyr.
==> default: Preparing to unpack .../r-cran-plyr_1.8-1build1_amd64.deb ...
==> default: Unpacking r-cran-plyr (1.8-1build1) ...
==> default: Selecting previously unselected package r-cran-stringr.
==> default: Preparing to unpack .../r-cran-stringr_0.6.2-1_all.deb ...
==> default: Unpacking r-cran-stringr (0.6.2-1) ...
==> default: Selecting previously unselected package r-cran-evaluate.
==> default: Preparing to unpack .../r-cran-evaluate_0.5.1-1_all.deb ...
==> default: Unpacking r-cran-evaluate (0.5.1-1) ...
==> default: Selecting previously unselected package r-cran-labeling.
==> default: Preparing to unpack .../r-cran-labeling_0.1-2_all.deb ...
==> default: Unpacking r-cran-labeling (0.1-2) ...
==> default: Selecting previously unselected package r-cran-munsell.
==> default: Preparing to unpack .../r-cran-munsell_0.4.2-1_all.deb ...
==> default: Unpacking r-cran-munsell (0.4.2-1) ...
==> default: Selecting previously unselected package r-cran-rcolorbrewer.
==> default: Preparing to unpack .../r-cran-rcolorbrewer_1.0-5-2_all.deb ...
==> default: Unpacking r-cran-rcolorbrewer (1.0-5-2) ...
==> default: Selecting previously unselected package r-cran-rcurl.
==> default: Preparing to unpack .../r-cran-rcurl_1.95-4.1-1_amd64.deb ...
==> default: Unpacking r-cran-rcurl (1.95-4.1-1) ...
==> default: Selecting previously unselected package r-cran-reshape.
==> default: Preparing to unpack .../r-cran-reshape_0.8.4-2build1_all.deb ...
==> default: Unpacking r-cran-reshape (0.8.4-2build1) ...
==> default: Selecting previously unselected package r-cran-rjson.
==> default: Preparing to unpack .../r-cran-rjson_0.2.13-1_amd64.deb ...
==> default: Unpacking r-cran-rjson (0.2.13-1) ...
==> default: Selecting previously unselected package r-cran-rmysql.
==> default: Preparing to unpack .../r-cran-rmysql_0.9-3-2_amd64.deb ...
==> default: Unpacking r-cran-rmysql (0.9-3-2) ...
==> default: Selecting previously unselected package r-cran-scales.
==> default: Preparing to unpack .../r-cran-scales_0.2.3-1_all.deb ...
==> default: Unpacking r-cran-scales (0.2.3-1) ...
==> default: Selecting previously unselected package r-cran-testthat.
==> default: Preparing to unpack .../r-cran-testthat_0.7.1-1_all.deb ...
==> default: Unpacking r-cran-testthat (0.7.1-1) ...
==> default: Selecting previously unselected package r-cran-xtable.
==> default: Preparing to unpack .../r-cran-xtable_1%3a1.7-1-1build1_all.deb ...
==> default: Unpacking r-cran-xtable (1:1.7-1-1build1) ...
==> default: Selecting previously unselected package r-cran-zoo.
==> default: Preparing to unpack .../r-cran-zoo_1.7-10-1_amd64.deb ...
==> default: Unpacking r-cran-zoo (1.7-10-1) ...
==> default: Selecting previously unselected package r-cran-xts.
==> default: Preparing to unpack .../r-cran-xts_0.9-7-1_amd64.deb ...
==> default: Unpacking r-cran-xts (0.9-7-1) ...
==> default: Processing triggers for man-db (2.6.7.1-1ubuntu1) ...
==> default: Setting up libcurl3-nss:amd64 (7.35.0-1ubuntu2.10) ...
==> default: Setting up libssh2-1:amd64 (1.4.3-2ubuntu0.1) ...
==> default: Setting up libssh2-1-dev:amd64 (1.4.3-2ubuntu0.1) ...
==> default: Setting up r-cran-littler (0.3.2-1trusty0) ...
==> default: Setting up littler (0.3.2-1trusty0) ...
==> default: Setting up r-cran-bitops (1.0-6-1) ...
==> default: Setting up r-cran-colorspace (1.2-2-1) ...
==> default: Setting up r-cran-dbi (0.2-7-1) ...
==> default: Setting up r-cran-dichromat (2.0.0-2) ...
==> default: Setting up r-cran-digest (0.6.4-1) ...
==> default: Setting up r-cran-plyr (1.8-1build1) ...
==> default: Setting up r-cran-stringr (0.6.2-1) ...
==> default: Setting up r-cran-evaluate (0.5.1-1) ...
==> default: Setting up r-cran-labeling (0.1-2) ...
==> default: Setting up r-cran-munsell (0.4.2-1) ...
==> default: Setting up r-cran-rcolorbrewer (1.0-5-2) ...
==> default: Setting up r-cran-rcurl (1.95-4.1-1) ...
==> default: Setting up r-cran-reshape (0.8.4-2build1) ...
==> default: Setting up r-cran-rjson (0.2.13-1) ...
==> default: Setting up r-cran-rmysql (0.9-3-2) ...
==> default: Setting up r-cran-scales (0.2.3-1) ...
==> default: Setting up r-cran-testthat (0.7.1-1) ...
==> default: Setting up r-cran-xtable (1:1.7-1-1build1) ...
==> default: Setting up r-cran-zoo (1.7-10-1) ...
==> default: Setting up r-cran-xts (0.9-7-1) ...
==> default: Processing triggers for libc-bin (2.19-0ubuntu6.9) ...
==> default: Providing R libraries - packages.r
==> default: Installing package into â/usr/local/lib/R/site-libraryâ
==> default: (as âlibâ is unspecified)
==> default: trying URL
'
https://bioconductor.org/packages/3.4/bioc/src/contrib/BiocInstaller_1.24.0.tar.gz'
==> default: Content type 'unknown'
==> default: length 17756 bytes (17 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ===========================================
==> default: downloaded 17 KB
==> default: * installing *source* package âBiocInstallerâ ...
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: Bioconductor version 3.4 (BiocInstaller 1.24.0), ?biocLite for help
==> default: * DONE (BiocInstaller)
==> default: The downloaded source packages are in
==> default: â/tmp/RtmpfpMOc5/downloaded_packagesâ
==> default: Bioconductor version 3.4 (BiocInstaller 1.24.0), ?biocLite for help
==> default: BioC_mirror:
https://bioconductor.org
==> default: Using Bioconductor 3.4 (BiocInstaller 1.24.0), R 3.3.2
(2016-10-31).
==> default: Installing package(s) âBiRewireâ, âgraphâ
==> default: also installing the dependencies âassertthatâ, âstringiâ,
âiteratorsâ, âgtableâ, âscalesâ, âtibbleâ, âlazyevalâ,
âplyrâ, âRcppâ, âpkgmakerâ, âregistryâ, ârngtoolsâ,
âstringrâ, âgridBaseâ, âforeachâ, âdoParallelâ, âggplot2â,
âreshape2â, âmagrittrâ, âNMFâ, âirlbaâ, âigraphâ,
âslamâ, âtsneâ, âBiocGenericsâ
==> default: trying URL
'
http://cran.r-project.org/src/contrib/assertthat_0.1.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 10187 bytes
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==============================================
==> default:
==> default: downloaded 10187 bytes
==> default: trying URL
'
http://cran.r-project.org/src/contrib/stringi_1.1.2.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 3644855 bytes (3.5 MB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 3.5 MB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/iterators_1.0.8.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 290412 bytes (283 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ====
==> default: =
==> default: ==
==> default: =
==> default: ====
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ====
==> default: ==
==> default: ====
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==
==> default: downloaded 283 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/gtable_0.2.0.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 24157 bytes (23 KB)
==> default: ========
==> default: =================
==> default: ========
==> default: =========
==> default: ========
==> default:
==> default: downloaded 23 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/scales_0.4.1.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 57703 bytes (56 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =====
==> default: ====
==> default: ==========
==> default: ===========
==> default: ====
==> default: =======
==> default: ====
==> default:
==> default: downloaded 56 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/tibble_1.2.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 54517 bytes (53 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =====
==> default: =
==> default: ===
==> default: ===
==> default: ====
==> default: ========
==> default: =======
==> default: ====
==> default: =========
==> default:
==> default: downloaded 53 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/lazyeval_0.2.0.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 317272 bytes (309 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 309 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/plyr_1.8.4.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 392451 bytes (383 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default:
==> default: downloaded 383 KB
==> default:
==> default: trying URL
'
http://cran.r-project.org/src/contrib/Rcpp_0.12.9.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 2372283 bytes (2.3 MB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 2.3 MB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/pkgmaker_0.22.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 351479 bytes (343 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 343 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/registry_0.3.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 177554 bytes (173 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ====
==> default: =
==> default: =
==> default: ==
==> default: downloaded 173 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/rngtools_1.2.4.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 120986 bytes (118 KB)
==> default: =
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: ==
==> default: ========
==> default: ==
==> default: ==
==> default: ==
==> default: ===
==> default: ==
==> default: =
==> default: ==
==> default: ==
==> default: =
==> default: ==
==> default: ==
==> default: ===
==> default: ==
==> default: ==
==> default: =
==> default: ==
==> default: ==
==> default: =
==> default: downloaded 118 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/stringr_1.2.0.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 94095 bytes (91 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ===
==> default: ==
==> default: ===
==> default: ==
==> default: ==
==> default: ==
==> default: ==
==> default: ===
==> default: ==
==> default: ==
==> default: =========
==> default:
==> default: downloaded 91 KB
==> default:
==> default: trying URL
'
http://cran.r-project.org/src/contrib/gridBase_0.4-7.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 153373 bytes (149 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: ===
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: ===
==> default: =
==> default: ===
==> default: ==
==> default: ===
==> default: =====
==> default:
==> default: downloaded 149 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/foreach_1.4.3.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 359787 bytes (351 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 351 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/doParallel_1.0.10.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 173022 bytes (168 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default: =
==> default: ====
==> default: =
==> default: =
==> default: ==
==> default:
==> default: downloaded 168 KB
==> default:
==> default: trying URL
'
http://cran.r-project.org/src/contrib/ggplot2_2.2.1.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 2213308 bytes (2.1 MB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 2.1 MB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/reshape2_1.4.2.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 34688 bytes (33 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =========
==> default: ======
==> default: ===
==> default:
==> default: downloaded 33 KB
==> default:
==> default: trying URL
'
http://cran.r-project.org/src/contrib/magrittr_1.5.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 200504 bytes (195 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ====
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==
==> default: =
==> default: =
==> default:
==> default: downloaded 195 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/NMF_0.20.6.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 1764466 bytes (1.7 MB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 1.7 MB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/irlba_2.1.2.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 218471 bytes (213 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ==
==> default:
==> default: downloaded 213 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/igraph_1.0.1.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 3328353 bytes (3.2 MB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 3.2 MB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/slam_0.1-40.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 50146 bytes (48 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ======
==> default: ====================
==> default: ========
==> default: ==========
==> default:
==> default: downloaded 48 KB
==> default: trying URL
'
http://cran.r-project.org/src/contrib/tsne_0.1-3.tar.gz'
==> default: Content type 'application/x-gzip'
==> default: length 4553 bytes
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ===========================================
==> default:
==> default: downloaded 4553 bytes
==> default: trying URL
'
https://bioconductor.org/packages/3.4/bioc/src/contrib/BiocGenerics_0.20.0.tar.gz'
==> default: Content type 'unknown'
==> default: length 40398 bytes (39 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: ====================
==> default: =
==> default: ========================
==> default: downloaded 39 KB
==> default: trying URL
'
https://bioconductor.org/packages/3.4/bioc/src/contrib/BiRewire_3.6.0.tar.gz'
==> default: Content type 'unknown'
==> default: length 652580 bytes (637 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 637 KB
==> default: trying URL
'
https://bioconductor.org/packages/3.4/bioc/src/contrib/graph_1.52.0.tar.gz'
==> default: Content type 'unknown'
==> default: length 958185 bytes (935 KB)
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: =
==> default: downloaded 935 KB
==> default: * installing *source* package âassertthatâ ...
==> default: ** package âassertthatâ successfully unpacked and MD5 sums
checked
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (assertthat)
==> default: * installing *source* package âstringiâ ...
==> default: ** package âstringiâ successfully unpacked and MD5 sums checked
==> default: checking for local ICUDT_DIR...
==> default: icu55/data
==> default: checking for R_HOME...
==> default: /usr/lib/R
==> default: checking for R...
==> default: /usr/lib/R/bin/R
==> default: checking for R >= 3.1.0...
==> default: yes
==> default: checking for cat...
==> default: /bin/cat
==> default: checking for gcc...
==> default: gcc -std=gnu99
==> default: checking whether the C compiler works...
==> default: yes
==> default: checking for C compiler default output file name...
==> default: a.out
==> default: checking for suffix of executables...
==> default: checking whether we are cross compiling...
==> default: no
==> default: checking for suffix of object files...
==> default: o
==> default: checking whether we are using the GNU C compiler...
==> default: yes
==> default: checking whether gcc -std=gnu99 accepts -g...
==> default: yes
==> default: checking for gcc -std=gnu99 option to accept ISO C89...
==> default: none needed
==> default: checking how to run the C preprocessor...
==> default: g++ -E
==> default: checking for grep that handles long lines and -e...
==> default: /bin/grep
==> default: checking for egrep...
==> default: /bin/grep -E
==> default: checking for ANSI C header files...
==> default: yes
==> default: checking for sys/types.h...
==> default: yes
==> default: checking for sys/stat.h...
==> default: yes
==> default: checking for stdlib.h...
==> default: yes
==> default: checking for string.h...
==> default: yes
==> default: checking for memory.h...
==> default: yes
==> default: checking for strings.h...
==> default: yes
==> default: checking for inttypes.h...
==> default: yes
==> default: checking for stdint.h...
==> default: yes
==> default: checking for unistd.h...
==> default: yes
==> default: checking elf.h usability...
==> default: yes
==> default: checking elf.h presence...
==> default: yes
==> default: checking for elf.h...
==> default: yes
==> default: checking whether we are using the GNU C++ compiler...
==> default: yes
==> default: checking whether g++ -std=c++11 accepts -g...
==> default: yes
==> default: checking whether the C++ compiler supports the long long type...
==> default: yes
==> default: checking whether the compiler implements namespaces...
==> default: yes
==> default: checking whether the compiler supports Standard Template
Library...
==> default: yes
==> default: checking whether std::map is available...
==> default: yes
==> default: checking for pkg-config...
==> default: /usr/bin/pkg-config
==> default: checking with pkg-config for ICU4C installed...
==> default: 52.1
==> default: checking for ICU4C >= 50...
==> default: yes
==> default: checking for proper CPPFLAGS, LDFLAGS, and LIBS...
==> default: done
==> default: checking whether we may build an ICU-based project...
==> default: yes
==> default: checking for available ICU data library (ucnv, uloc, utrans)...
==> default: yes
==> default: checking for available ICU data library (ucol)...
==> default: yes
==> default: configure: creating ./config.status
==> default: config.status: creating src/Makevars
==> default: config.status: creating src/uconfig_local.h
==> default: config.status: creating src/install.libs.R
==> default: *** stringi configure summary:
==> default: ICU_FOUND=1
==> default: ICUDT_DIR=icu55/data
==> default: STRINGI_CXXSTD=CXX_STD=CXX11
==> default: STRINGI_CFLAGS= -fpic
==> default: STRINGI_CPPFLAGS=-I. -I/usr/include/x86_64-linux-gnu
-UDEBUG -DNDEBUG -DU_HAVE_ELF_H
==> default: STRINGI_CXXFLAGS= -fpic
==> default: STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu
==> default: STRINGI_LIBS=-licui18n -licuuc -licudata
==> default: *** compiler settings used:
==> default: CC=gcc -std=gnu99
==> default: CPP=g++ -E
==> default: LD=g++
==> default: CFLAGS=-g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -fpic
==> default: CPPFLAGS= -UDEBUG -DNDEBUG
==> default: CXX=g++ -std=c++11
==> default: CXXFLAGS=-g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -fpic
==> default: LDFLAGS=
==> default: LIBS=
==> default: ** libs
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_brkiter.cpp -o
stri_brkiter.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_collator.cpp -o
stri_collator.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_common.cpp -o
stri_common.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_compare.cpp -o
stri_compare.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_base.cpp -o
stri_container_base.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_bytesearch.cpp
-o stri_container_bytesearch.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_listint.cpp -o
stri_container_listint.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_listraw.cpp -o
stri_container_listraw.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_listutf8.cpp
-o stri_container_listutf8.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_regex.cpp -o
stri_container_regex.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_usearch.cpp -o
stri_container_usearch.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_utf16.cpp -o
stri_container_utf16.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_container_utf8.cpp -o
stri_container_utf8.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c
stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_encoding_conversion.cpp
-o stri_encoding_conversion.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_encoding_detection.cpp
-o stri_encoding_detection.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_encoding_management.cpp
-o stri_encoding_management.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_escape.cpp -o
stri_escape.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_exception.cpp -o
stri_exception.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_ICU_settings.cpp -o
stri_ICU_settings.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_join.cpp -o stri_join.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_length.cpp -o
stri_length.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_pad.cpp -o stri_pad.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_prepare_arg.cpp -o
stri_prepare_arg.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_random.cpp -o
stri_random.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_reverse.cpp -o
stri_reverse.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_class_count.cpp
-o stri_search_class_count.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_class_detect.cpp
-o stri_search_class_detect.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_class_extract.cpp
-o stri_search_class_extract.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_class_locate.cpp
-o stri_search_class_locate.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_class_replace.cpp
-o stri_search_class_replace.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_class_split.cpp
-o stri_search_class_split.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c
stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_class_subset.cpp
-o stri_search_class_subset.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_class_trim.cpp -o
stri_search_class_trim.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_common.cpp -o
stri_search_common.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_coll_count.cpp -o
stri_search_coll_count.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_coll_detect.cpp
-o stri_search_coll_detect.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_coll_extract.cpp
-o stri_search_coll_extract.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_coll_locate.cpp
-o stri_search_coll_locate.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_coll_replace.cpp
-o stri_search_coll_replace.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_coll_split.cpp -o
stri_search_coll_split.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c
stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_coll_subset.cpp
-o stri_search_coll_subset.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c
stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c
stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c
stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c
stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_fixed_count.cpp
-o stri_search_fixed_count.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_fixed_detect.cpp
-o stri_search_fixed_detect.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_fixed_extract.cpp
-o stri_search_fixed_extract.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_fixed_locate.cpp
-o stri_search_fixed_locate.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_fixed_replace.cpp
-o stri_search_fixed_replace.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_fixed_split.cpp
-o stri_search_fixed_split.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_fixed_subset.cpp
-o stri_search_fixed_subset.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c
stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_in.cpp -o
stri_search_in.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_other_replace.cpp
-o stri_search_other_replace.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_other_split.cpp
-o stri_search_other_split.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_count.cpp
-o stri_search_regex_count.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_detect.cpp
-o stri_search_regex_detect.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_extract.cpp
-o stri_search_regex_extract.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_locate.cpp
-o stri_search_regex_locate.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_match.cpp
-o stri_search_regex_match.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_replace.cpp
-o stri_search_regex_replace.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_split.cpp
-o stri_search_regex_split.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_search_regex_subset.cpp
-o stri_search_regex_subset.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_sort.cpp -o stri_sort.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_stats.cpp -o stri_stats.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_stringi.cpp -o
stri_stringi.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_sub.cpp -o stri_sub.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_test.cpp -o stri_test.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_time_zone.cpp -o
stri_time_zone.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_time_calendar.cpp -o
stri_time_calendar.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_time_symbols.cpp -o
stri_time_symbols.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_time_format.cpp -o
stri_time_format.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_trans_casemap.cpp -o
stri_trans_casemap.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_trans_other.cpp -o
stri_trans_other.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_trans_normalization.cpp
-o stri_trans_normalization.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_trans_transliterate.cpp
-o stri_trans_transliterate.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_ucnv.cpp -o stri_ucnv.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_uloc.cpp -o stri_uloc.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_utils.cpp -o stri_utils.o
==> default: g++ -std=c++11 -I/usr/share/R/include -DNDEBUG -I.
-I/usr/include/x86_64-linux-gnu -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -fpic
-fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stri_wrap.cpp -o stri_wrap.o
==> default: g++ -std=c++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions
-Wl,-z,relro -o stringi.so stri_brkiter.o stri_collator.o stri_common.o
stri_compare.o stri_container_base.o stri_container_bytesearch.o
stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o
stri_container_regex.o stri_container_usearch.o stri_container_utf16.o
stri_container_utf8.o stri_container_utf8_indexable.o
stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o
stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o
stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o
stri_search_class_count.o stri_search_class_detect.o
stri_search_class_extract.o stri_search_class_locate.o
stri_search_class_replace.o stri_search_class_split.o
stri_search_class_startsendswith.o stri_search_class_subset.o
stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o
stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o
stri_search_col
==> default: l_replace.o stri_search_coll_split.o
stri_search_coll_startsendswith.o stri_search_coll_subset.o
stri_search_boundaries_count.o stri_search_boundaries_extract.o
stri_search_boundaries_locate.o stri_search_boundaries_split.o
stri_search_fixed_count.o stri_search_fixed_detect.o
stri_search_fixed_extract.o stri_search_fixed_locate.o
stri_search_fixed_replace.o stri_search_fixed_split.o
stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o
stri_search_other_replace.o stri_search_other_split.o stri_search_regex_count.o
stri_search_regex_detect.o stri_search_regex_extract.o
stri_search_regex_locate.o stri_search_regex_match.o
stri_search_regex_replace.o stri_search_regex_split.o
stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o
stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o
stri_time_format.o stri_trans_casemap.o stri_trans_other.o
stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o
stri_utils.o str
==> default: i_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata
-L/usr/lib/R/lib -lR
==> default: installing via 'install.libs.R' to
/usr/local/lib/R/site-library/stringi
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (stringi)
==> default: * installing *source* package âiteratorsâ ...
==> default: ** package âiteratorsâ successfully unpacked and MD5 sums
checked
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (iterators)
==> default: * installing *source* package âgtableâ ...
==> default: ** package âgtableâ successfully unpacked and MD5 sums checked
==> default: ** R
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (gtable)
==> default: * installing *source* package âlazyevalâ ...
==> default: ** package âlazyevalâ successfully unpacked and MD5 sums
checked
==> default: ** libs
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c expr.c -o expr.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c interp.c -o interp.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c lazy.c -o lazy.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c name.c -o name.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o
==> default: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions
-Wl,-z,relro -o lazyeval.so expr.o interp.o lazy.o name.o utils.o
-L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/lazyeval/libs
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (lazyeval)
==> default: * installing *source* package âRcppâ ...
==> default: ** package âRcppâ successfully unpacked and MD5 sums checked
==> default: ** libs
==> default: g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/ -fpic
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Date.cpp -o Date.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/ -fpic
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Module.cpp -o Module.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/ -fpic
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c Rcpp_init.cpp -o Rcpp_init.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/ -fpic
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c api.cpp -o api.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/ -fpic
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c attributes.cpp -o
attributes.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -I../inst/include/ -fpic
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c barrier.cpp -o barrier.o
==> default: g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro
-o Rcpp.so Date.o Module.o Rcpp_init.o api.o attributes.o barrier.o
-L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/Rcpp/libs
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (Rcpp)
==> default: * installing *source* package âregistryâ ...
==> default: ** package âregistryâ successfully unpacked and MD5 sums
checked
==> default: ** R
==> default: ** demo
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (registry)
==> default: * installing *source* package âgridBaseâ ...
==> default: ** package âgridBaseâ successfully unpacked and MD5 sums
checked
==> default: ** R
==> default: ** demo
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (gridBase)
==> default: * installing *source* package âmagrittrâ ...
==> default: ** package âmagrittrâ successfully unpacked and MD5 sums
checked
==> default: ** R
==> default: ** inst
==> default: ** byte-compile and prepare package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (magrittr)
==> default: * installing *source* package âirlbaâ ...
==> default: ** package âirlbaâ successfully unpacked and MD5 sums checked
==> default: ** libs
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG
-I"/usr/lib/R/library/Matrix/include" -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c irlb.c -o irlb.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG
-I"/usr/lib/R/library/Matrix/include" -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c utility.c -o utility.o
==> default: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions
-Wl,-z,relro -o irlba.so irlb.o utility.o -llapack -lblas -lgfortran -lm
-lquadmath -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/irlba/libs
==> default: ** R
==> default: ** demo
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (irlba)
==> default: * installing *source* package âslamâ ...
==> default: ** package âslamâ successfully unpacked and MD5 sums checked
==> default: ** libs
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c apply.c -o apply.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c grouped.c -o grouped.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c sparse.c -o sparse.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c util.c -o util.o
==> default: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions
-Wl,-z,relro -o slam.so apply.o grouped.o sparse.o util.o -lblas -lgfortran -lm
-lquadmath -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/slam/libs
==> default: ** R
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (slam)
==> default: * installing *source* package âtsneâ ...
==> default: ** package âtsneâ successfully unpacked and MD5 sums checked
==> default: ** R
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (tsne)
==> default: * installing *source* package âBiocGenericsâ ...
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: Creating a new generic function for âappendâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âas.data.frameâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âcbindâ in package
âBiocGenericsâ
==> default: Creating a new generic function for ârbindâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âdo.callâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âduplicatedâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âanyDuplicatedâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âevalâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âpmaxâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âpminâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âpmax.intâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âpmin.intâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âReduceâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âFilterâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âFindâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âMapâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âPositionâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âgetâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âmgetâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âgrepâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âgreplâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âis.unsortedâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âlapplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âsapplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âlengthsâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âmapplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âmatchâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âorderâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âpasteâ in package
âBiocGenericsâ
==> default: Creating a new generic function for ârankâ in package
âBiocGenericsâ
==> default: Creating a new generic function for ârownamesâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âcolnamesâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âunionâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âintersectâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âsetdiffâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âsortâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âtableâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âtapplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âuniqueâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âunsplitâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âwhichâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âwhich.maxâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âwhich.minâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âIQRâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âmadâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âxtabsâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âclusterCallâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âclusterApplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âclusterApplyLBâ in
package âBiocGenericsâ
==> default: Creating a new generic function for âclusterEvalQâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âclusterExportâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âclusterMapâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âparLapplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âparSapplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âparApplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âparRapplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âparCapplyâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âparLapplyLBâ in package
âBiocGenericsâ
==> default: Creating a new generic function for âparSapplyLBâ in package
âBiocGenericsâ
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (BiocGenerics)
==> default: * installing *source* package âtibbleâ ...
==> default: ** package âtibbleâ successfully unpacked and MD5 sums checked
==> default: ** libs
==> default: g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
==> default: g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c matrixToDataFrame.cpp -o matrixToDataFrame.o
==> default: g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro
-o tibble.so RcppExports.o matrixToDataFrame.o -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/tibble/libs
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (tibble)
==> default: * installing *source* package âplyrâ ...
==> default: ** package âplyrâ successfully unpacked and MD5 sums checked
==> default: ** libs
==> default: g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c loop_apply.c -o loop_apply.o
==> default: g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c split-numeric.cpp -o split-numeric.o
==> default: g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro
-o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/plyr/libs
==> default: ** R
==> default: ** data
==> default: *** moving datasets to lazyload DB
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (plyr)
==> default: * installing *source* package âstringrâ ...
==> default: ** package âstringrâ successfully unpacked and MD5 sums checked
==> default: ** R
==> default: ** data
==> default: *** moving datasets to lazyload DB
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (stringr)
==> default: * installing *source* package âforeachâ ...
==> default: ** package âforeachâ successfully unpacked and MD5 sums checked
==> default: ** R
==> default: ** demo
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (foreach)
==> default: * installing *source* package âgraphâ ...
==> default: ** libs
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c graph.c -o graph.o
==> default: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions
-Wl,-z,relro -o graph.so graph.o -L/usr/lib/R/lib -lR
==> default: mv graph.so BioC_graph.so
==> default: installing to /usr/local/lib/R/site-library/graph/libs
==> default: ** R
==> default: ** data
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (graph)
==> default: * installing *source* package âscalesâ ...
==> default: ** package âscalesâ successfully unpacked and MD5 sums checked
==> default: ** libs
==> default: g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
==> default: g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c colors.cpp -o colors.o
==> default: g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro
-o scales.so RcppExports.o colors.o -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/scales/libs
==> default: ** R
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (scales)
==> default: * installing *source* package âpkgmakerâ ...
==> default: ** package âpkgmakerâ successfully unpacked and MD5 sums
checked
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: Creating meta registry in package 'pkgmaker' ...
==> default: OK
==> default: Creating registry 'extra_handler' in package 'pkgmaker' ...
==> default: OK
==> default: Creating registry 'extra_action' in package 'pkgmaker' ...
==> default: OK
==> default: Registering extra handler 'install.packages' [function] ...
==> default: OK
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (pkgmaker)
==> default: * installing *source* package âdoParallelâ ...
==> default: ** package âdoParallelâ successfully unpacked and MD5 sums
checked
==> default: ** R
==> default: ** demo
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (doParallel)
==> default: * installing *source* package âreshape2â ...
==> default: ** package âreshape2â successfully unpacked and MD5 sums
checked
==> default: ** libs
==> default: g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
==> default: g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c melt.cpp -o melt.o
==> default: g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro
-o reshape2.so RcppExports.o melt.o -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/reshape2/libs
==> default: ** R
==> default: ** data
==> default: *** moving datasets to lazyload DB
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (reshape2)
==> default: * installing *source* package ârngtoolsâ ...
==> default: ** package ârngtoolsâ successfully unpacked and MD5 sums
checked
==> default: ** R
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (rngtools)
==> default: * installing *source* package âggplot2â ...
==> default: ** package âggplot2â successfully unpacked and MD5 sums checked
==> default: ** R
==> default: ** data
==> default: *** moving datasets to lazyload DB
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (ggplot2)
==> default: * installing *source* package âNMFâ ...
==> default: ** package âNMFâ successfully unpacked and MD5 sums checked
==> default: ** libs
==> default: g++ -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c distance.cpp -o distance.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c divergence.cpp -o divergence.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c euclidean.cpp -o euclidean.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c utils.cpp -o utils.o
==> default: g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro
-o NMF.so distance.o divergence.o euclidean.o utils.o -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/NMF/libs
==> default: ** R
==> default: ** data
==> default: ** demo
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: Setting package specific options: package:NMF (10 default
option(s))
==> default: Registering extra action 'Biobase' for handler 'install.packages'
...
==> default: OK
==> default: Creating meta registry in package 'NMF' ...
==> default: OK
==> default: Creating registry 'pkgmaker::extra_action' in package 'NMF' ...
==> default: OK
==> default: Adding entry 'Biobase' in registry 'pkgmaker::extra_action' ...
==> default: OK
==> default: Creating registry 'algorithm' in package 'NMF' ...
==> default: OK
==> default: Registering NMF algorithm '.R#brunet' [NMFStrategyIterative] ...
==> default: OK
==> default: Registering NMF algorithm 'brunet' [NMFStrategyIterative] based on
template '.R#brunet' ...
==> default: OK
==> default: Registering NMF algorithm 'KL' [NMFStrategyIterative] ...
==> default: OK
==> default: Registering NMF algorithm '.R#lee' [NMFStrategyIterative] ...
==> default: OK
==> default: Registering NMF algorithm 'lee' [NMFStrategyIterative] based on
template '.R#lee' ...
==> default: OK
==> default: Registering NMF algorithm 'Frobenius' [NMFStrategyIterative] ...
==> default: OK
==> default: Registering NMF algorithm '.R#offset' [NMFStrategyIterative] ...
==> default: OK
==> default: Registering NMF algorithm 'offset' [NMFStrategyIterative] based on
template '.R#offset' ...
==> default: OK
==> default: Registering NMF algorithm '.R#nsNMF' [NMFStrategyIterative] ...
==> default: OK
==> default: Registering NMF algorithm 'nsNMF' [NMFStrategyIterative] based on
template '.R#nsNMF' ...
==> default: OK
==> default: Registering NMF algorithm '.M#brunet' [NMFStrategyOctave] ...
==> default: OK
==> default: Registering NMF algorithm 'ls-nmf' [NMFStrategyIterative] ...
==> default: OK
==> default: Registering NMF algorithm 'pe-nmf' [NMFStrategyIterative] ...
==> default: OK
==> default: Registering NMF algorithm '.siNMF' [NMFStrategyIterative] based on
template 'lee' ...
==> default: OK
==> default: Registering NMF algorithm 'siNMF' [NMFStrategyIterative] based on
template 'lee' ...
==> default: OK
==> default: Registering NMF algorithm 'snmf/r' [NMFStrategyFunction] ...
==> default: OK
==> default: Registering NMF algorithm 'snmf/l' [NMFStrategyFunction] ...
==> default: OK
==> default: Creating registry 'seed' in package 'NMF' ...
==> default: OK
==> default: Registering extra action 'bigmemory' for handler
'install.packages' ...
==> default: OK
==> default: Adding entry 'bigmemory' in registry 'pkgmaker::extra_action' ...
==> default: OK
==> default: Registering extra action 'synchronicity' for handler
'install.packages' ...
==> default: OK
==> default: Adding entry 'synchronicity' in registry 'pkgmaker::extra_action'
...
==> default: OK
==> default: Registering NMF seeding method 'none' [NMFSeed] ...
==> default: OK
==> default: Registering NMF seeding method 'random' [NMFSeed] ...
==> default: OK
==> default: Registering NMF seeding method 'ica' [NMFSeed] ...
==> default: OK
==> default: Registering NMF seeding method 'nndsvd' [NMFSeed] ...
==> default: OK
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (NMF)
==> default: * installing *source* package âigraphâ ...
==> default: ** package âigraphâ successfully unpacked and MD5 sums checked
==> default: checking for gcc...
==> default: gcc -std=gnu99
==> default: checking whether the C compiler works...
==> default: yes
==> default: checking for C compiler default output file name...
==> default: a.out
==> default: checking for suffix of executables...
==> default: checking whether we are cross compiling...
==> default: no
==> default: checking for suffix of object files...
==> default: o
==> default: checking whether we are using the GNU C compiler...
==> default: yes
==> default: checking whether gcc -std=gnu99 accepts -g...
==> default: yes
==> default: checking for gcc -std=gnu99 option to accept ISO C89...
==> default: none needed
==> default: checking whether we are using the GNU Fortran compiler...
==> default: yes
==> default: checking whether gfortran accepts -g...
==> default: yes
==> default: checking whether we are using the GNU C++ compiler...
==> default: yes
==> default: checking whether g++ accepts -g...
==> default: yes
==> default: checking how to run the C++ preprocessor...
==> default: g++ -E
==> default: checking for rintf...
==> default: yes
==> default: checking for finite...
==> default: yes
==> default: checking for expm1...
==> default: yes
==> default: checking for rint...
==> default: yes
==> default: checking for log2...
==> default: yes
==> default: checking for logbl...
==> default: yes
==> default: checking for snprintf...
==> default: yes
==> default: checking for log1p...
==> default: yes
==> default: checking for round...
==> default: yes
==> default: checking for fmin...
==> default: yes
==> default: checking for stpcpy...
==> default: yes
==> default: checking how to run the C preprocessor...
==> default: gcc -std=gnu99 -E
==> default: checking for grep that handles long lines and -e...
==> default: /bin/grep
==> default: checking for egrep...
==> default: /bin/grep -E
==> default: checking for ANSI C header files...
==> default: yes
==> default: checking for sys/types.h...
==> default: yes
==> default: checking for sys/stat.h...
==> default: yes
==> default: checking for stdlib.h...
==> default: yes
==> default: checking for string.h...
==> default: yes
==> default: checking for memory.h...
==> default: yes
==> default: checking for strings.h...
==> default: yes
==> default: checking for inttypes.h...
==> default: yes
==> default: checking for stdint.h...
==> default: yes
==> default: checking for unistd.h...
==> default: yes
==> default: checking whether stpcpy is declared...
==> default: yes
==> default: checking sys/times.h usability...
==> default: yes
==> default: checking sys/times.h presence...
==> default: yes
==> default: checking for sys/times.h...
==> default: yes
==> default: checking net/if.h usability...
==> default: yes
==> default: checking net/if.h presence...
==> default: yes
==> default: checking for net/if.h...
==> default: yes
==> default: checking netinet/in.h usability...
==> default: yes
==> default: checking netinet/in.h presence...
==> default: yes
==> default: checking for netinet/in.h...
==> default: yes
==> default: checking net/if_dl.h usability...
==> default: no
==> default: checking net/if_dl.h presence...
==> default: no
==> default: checking for net/if_dl.h...
==> default: no
==> default: checking sys/sockio.h usability...
==> default: no
==> default: checking sys/sockio.h presence...
==> default: no
==> default: checking for sys/sockio.h...
==> default: no
==> default: checking sys/un.h usability...
==> default: yes
==> default: checking sys/un.h presence...
==> default: yes
==> default: checking for sys/un.h...
==> default: yes
==> default: checking sys/socket.h usability...
==> default: yes
==> default: checking sys/socket.h presence...
==> default: yes
==> default: checking for sys/socket.h...
==> default: yes
==> default: checking sys/ioctl.h usability...
==> default: yes
==> default: checking sys/ioctl.h presence...
==> default: yes
==> default: checking for sys/ioctl.h...
==> default: yes
==> default: checking sys/time.h usability...
==> default: yes
==> default: checking sys/time.h presence...
==> default: yes
==> default: checking for sys/time.h...
==> default: yes
==> default: checking sys/file.h usability...
==> default: yes
==> default: checking sys/file.h presence...
==> default: yes
==> default: checking for sys/file.h...
==> default: yes
==> default: checking for struct sockaddr.sa_len...
==> default: no
==> default: checking for xml2-config...
==> default: /usr/bin/xml2-config
==> default: checking for xmlSAXUserParseFile in -lxml2...
==> default: yes
==> default: checking libxml/parser.h usability...
==> default: yes
==> default: checking libxml/parser.h presence...
==> default: yes
==> default: checking for libxml/parser.h...
==> default: yes
==> default: checking for __gmpz_add in -lgmp...
==> default: no
==> default: configure: creating ./config.status
==> default: config.status: creating src/Makevars.tmp
==> default: config.status: creating src/Makevars
==> default: config.status: creating src/config.h
==> default: ** libs
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c AMD/Source/amd.f -o AMD/Source/amd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_1.c -o AMD/Source/amd_1.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_2.c -o AMD/Source/amd_2.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_aat.c -o AMD/Source/amd_aat.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_control.c -o AMD/Source/amd_control.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_defaults.c -o AMD/Source/amd_defaults.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_dump.c -o AMD/Source/amd_dump.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_global.c -o AMD/Source/amd_global.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_info.c -o AMD/Source/amd_info.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_order.c -o AMD/Source/amd_order.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_post_tree.c -o AMD/Source/amd_post_tree.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_postorder.c -o AMD/Source/amd_postorder.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_preprocess.c -o AMD/Source/amd_preprocess.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c AMD/Source/amd_valid.c -o AMD/Source/amd_valid.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c AMD/Source/amdbar.f -o AMD/Source/amdbar.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Check/cholmod_check.c -o CHOLMOD/Check/cholmod_check.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Check/cholmod_read.c -o CHOLMOD/Check/cholmod_read.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Check/cholmod_write.c -o CHOLMOD/Check/cholmod_write.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_amd.c -o CHOLMOD/Cholesky/cholmod_amd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_analyze.c -o CHOLMOD/Cholesky/cholmod_analyze.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_colamd.c -o CHOLMOD/Cholesky/cholmod_colamd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_etree.c -o CHOLMOD/Cholesky/cholmod_etree.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_factorize.c -o
CHOLMOD/Cholesky/cholmod_factorize.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_postorder.c -o
CHOLMOD/Cholesky/cholmod_postorder.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_rcond.c -o CHOLMOD/Cholesky/cholmod_rcond.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_resymbol.c -o
CHOLMOD/Cholesky/cholmod_resymbol.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_rowcolcounts.c -o
CHOLMOD/Cholesky/cholmod_rowcolcounts.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_rowfac.c -o CHOLMOD/Cholesky/cholmod_rowfac.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_solve.c -o CHOLMOD/Cholesky/cholmod_solve.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Cholesky/cholmod_spsolve.c -o CHOLMOD/Cholesky/cholmod_spsolve.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_aat.c -o CHOLMOD/Core/cholmod_aat.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_add.c -o CHOLMOD/Core/cholmod_add.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_band.c -o CHOLMOD/Core/cholmod_band.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_change_factor.c -o
CHOLMOD/Core/cholmod_change_factor.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_common.c -o CHOLMOD/Core/cholmod_common.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_complex.c -o CHOLMOD/Core/cholmod_complex.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_copy.c -o CHOLMOD/Core/cholmod_copy.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_dense.c -o CHOLMOD/Core/cholmod_dense.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_error.c -o CHOLMOD/Core/cholmod_error.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_factor.c -o CHOLMOD/Core/cholmod_factor.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_memory.c -o CHOLMOD/Core/cholmod_memory.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_sparse.c -o CHOLMOD/Core/cholmod_sparse.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_transpose.c -o CHOLMOD/Core/cholmod_transpose.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_triplet.c -o CHOLMOD/Core/cholmod_triplet.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Core/cholmod_version.c -o CHOLMOD/Core/cholmod_version.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_drop.c -o CHOLMOD/MatrixOps/cholmod_drop.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_horzcat.c -o
CHOLMOD/MatrixOps/cholmod_horzcat.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_norm.c -o CHOLMOD/MatrixOps/cholmod_norm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_scale.c -o CHOLMOD/MatrixOps/cholmod_scale.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_sdmult.c -o CHOLMOD/MatrixOps/cholmod_sdmult.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_ssmult.c -o CHOLMOD/MatrixOps/cholmod_ssmult.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_submatrix.c -o
CHOLMOD/MatrixOps/cholmod_submatrix.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_symmetry.c -o
CHOLMOD/MatrixOps/cholmod_symmetry.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/MatrixOps/cholmod_vertcat.c -o
CHOLMOD/MatrixOps/cholmod_vertcat.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Modify/cholmod_rowadd.c -o CHOLMOD/Modify/cholmod_rowadd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Modify/cholmod_rowdel.c -o CHOLMOD/Modify/cholmod_rowdel.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Modify/cholmod_updown.c -o CHOLMOD/Modify/cholmod_updown.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Partition/cholmod_camd.c -o CHOLMOD/Partition/cholmod_camd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Partition/cholmod_ccolamd.c -o
CHOLMOD/Partition/cholmod_ccolamd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Partition/cholmod_csymamd.c -o
CHOLMOD/Partition/cholmod_csymamd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Partition/cholmod_metis.c -o CHOLMOD/Partition/cholmod_metis.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Partition/cholmod_nesdis.c -o CHOLMOD/Partition/cholmod_nesdis.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Supernodal/cholmod_super_numeric.c -o
CHOLMOD/Supernodal/cholmod_super_numeric.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Supernodal/cholmod_super_solve.c -o
CHOLMOD/Supernodal/cholmod_super_solve.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c CHOLMOD/Supernodal/cholmod_super_symbolic.c -o
CHOLMOD/Supernodal/cholmod_super_symbolic.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c COLAMD/Source/colamd.c -o COLAMD/Source/colamd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c COLAMD/Source/colamd_global.c -o COLAMD/Source/colamd_global.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c DensityGrid.cpp -o DensityGrid.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c DensityGrid_3d.cpp -o DensityGrid_3d.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c NetDataTypes.cpp -o NetDataTypes.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c NetRoutines.cpp -o NetRoutines.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c SuiteSparse_config/SuiteSparse_config.c -o
SuiteSparse_config/SuiteSparse_config.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c adjlist.c -o adjlist.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c arpack.c -o arpack.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c array.c -o array.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c atlas.c -o atlas.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c attributes.c -o attributes.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c basic_query.c -o basic_query.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bfgs.c -o bfgs.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bigint.c -o bigint.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bignum.c -o bignum.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bipartite.c -o bipartite.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c blas.c -o blas.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bliss.cc -o bliss.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bliss_eqrefhash.cc -o bliss_eqrefhash.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bliss_graph.cc -o bliss_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bliss_heap.cc -o bliss_heap.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bliss_orbit.cc -o bliss_orbit.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bliss_partition.cc -o bliss_partition.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bliss_timer.cc -o bliss_timer.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c bliss_utils.cc -o bliss_utils.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cattributes.c -o cattributes.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c centrality.c -o centrality.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cliques.c -o cliques.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c clustertool.cpp -o clustertool.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cocitation.c -o cocitation.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cohesive_blocks.c -o cohesive_blocks.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c community.c -o community.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c complex.c -o complex.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c components.c -o components.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c conversion.c -o conversion.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cores.c -o cores.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_add.c -o cs/cs_add.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_amd.c -o cs/cs_amd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_chol.c -o cs/cs_chol.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_cholsol.c -o cs/cs_cholsol.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_compress.c -o cs/cs_compress.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_counts.c -o cs/cs_counts.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_cumsum.c -o cs/cs_cumsum.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_dfs.c -o cs/cs_dfs.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_dmperm.c -o cs/cs_dmperm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_droptol.c -o cs/cs_droptol.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_dropzeros.c -o cs/cs_dropzeros.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_dupl.c -o cs/cs_dupl.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_entry.c -o cs/cs_entry.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_ereach.c -o cs/cs_ereach.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_etree.c -o cs/cs_etree.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_fkeep.c -o cs/cs_fkeep.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_gaxpy.c -o cs/cs_gaxpy.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_happly.c -o cs/cs_happly.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_house.c -o cs/cs_house.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_ipvec.c -o cs/cs_ipvec.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_leaf.c -o cs/cs_leaf.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_load.c -o cs/cs_load.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_lsolve.c -o cs/cs_lsolve.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_ltsolve.c -o cs/cs_ltsolve.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_lu.c -o cs/cs_lu.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_lusol.c -o cs/cs_lusol.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_malloc.c -o cs/cs_malloc.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_maxtrans.c -o cs/cs_maxtrans.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_multiply.c -o cs/cs_multiply.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_norm.c -o cs/cs_norm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_permute.c -o cs/cs_permute.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_pinv.c -o cs/cs_pinv.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_post.c -o cs/cs_post.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_print.c -o cs/cs_print.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_pvec.c -o cs/cs_pvec.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_qr.c -o cs/cs_qr.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_qrsol.c -o cs/cs_qrsol.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_randperm.c -o cs/cs_randperm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_reach.c -o cs/cs_reach.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_scatter.c -o cs/cs_scatter.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_scc.c -o cs/cs_scc.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_schol.c -o cs/cs_schol.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_spsolve.c -o cs/cs_spsolve.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_sqr.c -o cs/cs_sqr.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_symperm.c -o cs/cs_symperm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_tdfs.c -o cs/cs_tdfs.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_transpose.c -o cs/cs_transpose.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_updown.c -o cs/cs_updown.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_usolve.c -o cs/cs_usolve.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_util.c -o cs/cs_util.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c cs/cs_utsolve.c -o cs/cs_utsolve.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c decomposition.c -o decomposition.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c distances.c -o distances.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c dotproduct.c -o dotproduct.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c dqueue.c -o dqueue.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c drl_graph.cpp -o drl_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c drl_graph_3d.cpp -o drl_graph_3d.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c drl_layout.cpp -o drl_layout.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c drl_layout_3d.cpp -o drl_layout_3d.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c drl_parse.cpp -o drl_parse.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c eigen.c -o eigen.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c embedding.c -o embedding.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c fast_community.c -o fast_community.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c feedback_arc_set.c -o feedback_arc_set.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c flow.c -o flow.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-dl-lexer.c -o foreign-dl-lexer.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-dl-parser.c -o foreign-dl-parser.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-gml-lexer.c -o foreign-gml-lexer.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-gml-parser.c -o foreign-gml-parser.o
==> default: In file included from src/foreign-gml-parser.y:59:0:
==> default: igraph_hacks_internal.h:42:0: warning: "strdup" redefined [enabled
by default]
==> default: # define strdup igraph_i_strdup
==> default: ^
==> default: In file included from /usr/include/string.h:635:0,
==> default: from src/foreign-gml-parser.y:54:
==> default: /usr/include/x86_64-linux-gnu/bits/string2.h:1291:0: note: this is
the location of the previous definition
==> default: # define strdup(s) __strdup (s)
==> default: ^
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-graphml.c -o foreign-graphml.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-lgl-lexer.c -o foreign-lgl-lexer.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-lgl-parser.c -o foreign-lgl-parser.o
==> default: In file included from src/foreign-lgl-parser.y:54:0:
==> default: igraph_hacks_internal.h:42:0: warning: "strdup" redefined [enabled
by default]
==> default: # define strdup igraph_i_strdup
==> default: ^
==> default: In file included from /usr/include/string.h:635:0,
==> default: from src/foreign-lgl-parser.y:53:
==> default: /usr/include/x86_64-linux-gnu/bits/string2.h:1291:0: note: this is
the location of the previous definition
==> default: # define strdup(s) __strdup (s)
==> default: ^
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-ncol-lexer.c -o foreign-ncol-lexer.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-ncol-parser.c -o foreign-ncol-parser.o
==> default: In file included from src/foreign-ncol-parser.y:54:0:
==> default: igraph_hacks_internal.h:42:0: warning: "strdup" redefined [enabled
by default]
==> default: # define strdup igraph_i_strdup
==> default: ^
==> default: In file included from /usr/include/string.h:635:0,
==> default: from src/foreign-ncol-parser.y:53:
==> default: /usr/include/x86_64-linux-gnu/bits/string2.h:1291:0: note: this is
the location of the previous definition
==> default: # define strdup(s) __strdup (s)
==> default: ^
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-pajek-lexer.c -o foreign-pajek-lexer.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign-pajek-parser.c -o foreign-pajek-parser.o
==> default: In file included from src/foreign-pajek-parser.y:54:0:
==> default: igraph_hacks_internal.h:42:0: warning: "strdup" redefined [enabled
by default]
==> default: # define strdup igraph_i_strdup
==> default: ^
==> default: In file included from /usr/include/string.h:635:0,
==> default: from src/foreign-pajek-parser.y:53:
==> default: /usr/include/x86_64-linux-gnu/bits/string2.h:1291:0: note: this is
the location of the previous definition
==> default: # define strdup(s) __strdup (s)
==> default: ^
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c foreign.c -o foreign.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c forestfire.c -o forestfire.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c fortran_intrinsics.c -o fortran_intrinsics.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c games.c -o games.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c gengraph_box_list.cpp -o gengraph_box_list.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c gengraph_degree_sequence.cpp -o gengraph_degree_sequence.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c gengraph_graph_molloy_hash.cpp -o gengraph_graph_molloy_hash.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c gengraph_graph_molloy_optimized.cpp -o gengraph_graph_molloy_optimized.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c gengraph_mr-connected.cpp -o gengraph_mr-connected.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c gengraph_powerlaw.cpp -o gengraph_powerlaw.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c gengraph_random.cpp -o gengraph_random.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glet.c -o glet.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk_support.c -o glpk_support.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c gml_tree.c -o gml_tree.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c hacks.c -o hacks.o
==> default: In file included from hacks.c:27:0:
==> default: igraph_hacks_internal.h:42:0: warning: "strdup" redefined [enabled
by default]
==> default: # define strdup igraph_i_strdup
==> default: ^
==> default: In file included from /usr/include/string.h:635:0,
==> default: from /usr/include/memory.h:29,
==> default: from hacks.c:24:
==> default: /usr/include/x86_64-linux-gnu/bits/string2.h:1291:0: note: this is
the location of the previous definition
==> default: # define strdup(s) __strdup (s)
==> default: ^
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c heap.c -o heap.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_buckets.c -o igraph_buckets.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_error.c -o igraph_error.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_estack.c -o igraph_estack.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_fixed_vectorlist.c -o igraph_fixed_vectorlist.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_grid.c -o igraph_grid.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_hashtable.c -o igraph_hashtable.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_heap.c -o igraph_heap.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_hrg.cc -o igraph_hrg.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_hrg_types.cc -o igraph_hrg_types.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_marked_queue.c -o igraph_marked_queue.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_psumtree.c -o igraph_psumtree.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_set.c -o igraph_set.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_stack.c -o igraph_stack.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_strvector.c -o igraph_strvector.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c igraph_trie.c -o igraph_trie.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c infomap.cc -o infomap.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c infomap_FlowGraph.cc -o infomap_FlowGraph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c infomap_Greedy.cc -o infomap_Greedy.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c infomap_Node.cc -o infomap_Node.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c interrupt.c -o interrupt.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c iterators.c -o iterators.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c lad.c -o lad.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c lapack.c -o lapack.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c layout.c -o layout.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c layout_dh.c -o layout_dh.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c layout_fr.c -o layout_fr.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c layout_gem.c -o layout_gem.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c layout_kk.c -o layout_kk.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c lsap.c -o lsap.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c matching.c -o matching.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c math.c -o math.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c matrix.c -o matrix.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c maximal_cliques.c -o maximal_cliques.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c memory.c -o memory.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c microscopic_update.c -o microscopic_update.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c mixing.c -o mixing.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c motifs.c -o motifs.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c operators.c -o operators.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c optimal_modularity.c -o optimal_modularity.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c other.c -o other.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c paths.c -o paths.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c plfit/error.c -o plfit/error.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c plfit/gss.c -o plfit/gss.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c plfit/kolmogorov.c -o plfit/kolmogorov.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c plfit/lbfgs.c -o plfit/lbfgs.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c plfit/options.c -o plfit/options.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c plfit/plfit.c -o plfit/plfit.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c plfit/zeta.c -o plfit/zeta.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c pottsmodel_2.cpp -o pottsmodel_2.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c progress.c -o progress.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack.cpp -o prpack.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_base_graph.cpp -o prpack/prpack_base_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_igraph_graph.cpp -o prpack/prpack_igraph_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_preprocessed_ge_graph.cpp -o
prpack/prpack_preprocessed_ge_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_preprocessed_gs_graph.cpp -o
prpack/prpack_preprocessed_gs_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_preprocessed_scc_graph.cpp -o
prpack/prpack_preprocessed_scc_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_preprocessed_schur_graph.cpp -o
prpack/prpack_preprocessed_schur_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_result.cpp -o prpack/prpack_result.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_solver.cpp -o prpack/prpack_solver.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c prpack/prpack_utils.cpp -o prpack/prpack_utils.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c qsort.c -o qsort.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c qsort_r.c -o qsort_r.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c random.c -o random.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c random_walk.c -o random_walk.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c sbm.c -o sbm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c scan.c -o scan.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c scg.c -o scg.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c scg_approximate_methods.c -o scg_approximate_methods.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c scg_exact_scg.c -o scg_exact_scg.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c scg_kmeans.c -o scg_kmeans.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c scg_optimal_method.c -o scg_optimal_method.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c scg_utils.c -o scg_utils.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c separators.c -o separators.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c sir.c -o sir.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c spanning_trees.c -o spanning_trees.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c sparsemat.c -o sparsemat.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c spectral_properties.c -o spectral_properties.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c spmatrix.c -o spmatrix.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c st-cuts.c -o st-cuts.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c statusbar.c -o statusbar.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c structural_properties.c -o structural_properties.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c structure_generators.c -o structure_generators.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c sugiyama.c -o sugiyama.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c topology.c -o topology.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c triangles.c -o triangles.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c type_indexededgelist.c -o type_indexededgelist.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c types.c -o types.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c vector.c -o vector.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c vector_ptr.c -o vector_ptr.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c version.c -o version.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c visitors.c -o visitors.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c walktrap.cpp -o walktrap.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c walktrap_communities.cpp -o walktrap_communities.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c walktrap_graph.cpp -o walktrap_graph.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c walktrap_heap.cpp -o walktrap_heap.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c zeroin.c -o zeroin.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dgetv0.f -o dgetv0.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dlaqrb.f -o dlaqrb.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dmout.f -o dmout.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dnaitr.f -o dnaitr.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dnapps.f -o dnapps.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dnaup2.f -o dnaup2.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dnaupd.f -o dnaupd.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dnconv.f -o dnconv.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dneigh.f -o dneigh.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dneupd.f -o dneupd.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dngets.f -o dngets.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsaitr.f -o dsaitr.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsapps.f -o dsapps.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsaup2.f -o dsaup2.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsaupd.f -o dsaupd.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsconv.f -o dsconv.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dseigt.f -o dseigt.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsesrt.f -o dsesrt.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dseupd.f -o dseupd.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsgets.f -o dsgets.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsortc.f -o dsortc.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dsortr.f -o dsortr.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dstatn.f -o dstatn.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dstats.f -o dstats.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dstqrb.f -o dstqrb.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c dvout.f -o dvout.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c ivout.f -o ivout.o
==> default: gfortran -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -c second.f -o second.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_1.c -o glpk/amd/amd_1.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_2.c -o glpk/amd/amd_2.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_aat.c -o glpk/amd/amd_aat.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_control.c -o glpk/amd/amd_control.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_defaults.c -o glpk/amd/amd_defaults.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_dump.c -o glpk/amd/amd_dump.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_info.c -o glpk/amd/amd_info.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_order.c -o glpk/amd/amd_order.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_post_tree.c -o glpk/amd/amd_post_tree.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_postorder.c -o glpk/amd/amd_postorder.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_preprocess.c -o glpk/amd/amd_preprocess.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/amd/amd_valid.c -o glpk/amd/amd_valid.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/colamd/colamd.c -o glpk/colamd/colamd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi01.c -o glpk/glpapi01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi02.c -o glpk/glpapi02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi03.c -o glpk/glpapi03.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi04.c -o glpk/glpapi04.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi05.c -o glpk/glpapi05.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi06.c -o glpk/glpapi06.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi07.c -o glpk/glpapi07.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi08.c -o glpk/glpapi08.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi09.c -o glpk/glpapi09.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi10.c -o glpk/glpapi10.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi11.c -o glpk/glpapi11.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi12.c -o glpk/glpapi12.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi13.c -o glpk/glpapi13.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi14.c -o glpk/glpapi14.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi15.c -o glpk/glpapi15.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi16.c -o glpk/glpapi16.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi17.c -o glpk/glpapi17.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi18.c -o glpk/glpapi18.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpapi19.c -o glpk/glpapi19.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpavl.c -o glpk/glpavl.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpbfd.c -o glpk/glpbfd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpbfx.c -o glpk/glpbfx.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpcpx.c -o glpk/glpcpx.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpdmp.c -o glpk/glpdmp.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpdmx.c -o glpk/glpdmx.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpenv01.c -o glpk/glpenv01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpenv02.c -o glpk/glpenv02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpenv03.c -o glpk/glpenv03.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpenv04.c -o glpk/glpenv04.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpenv05.c -o glpk/glpenv05.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpenv06.c -o glpk/glpenv06.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpenv07.c -o glpk/glpenv07.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpenv08.c -o glpk/glpenv08.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpfhv.c -o glpk/glpfhv.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpgmp.c -o glpk/glpgmp.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glphbm.c -o glpk/glphbm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpini01.c -o glpk/glpini01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpini02.c -o glpk/glpini02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios01.c -o glpk/glpios01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios02.c -o glpk/glpios02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios03.c -o glpk/glpios03.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios04.c -o glpk/glpios04.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios05.c -o glpk/glpios05.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios06.c -o glpk/glpios06.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios07.c -o glpk/glpios07.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios08.c -o glpk/glpios08.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios09.c -o glpk/glpios09.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios10.c -o glpk/glpios10.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios11.c -o glpk/glpios11.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpios12.c -o glpk/glpios12.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpipm.c -o glpk/glpipm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glplib01.c -o glpk/glplib01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glplib02.c -o glpk/glplib02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glplib03.c -o glpk/glplib03.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glplpf.c -o glpk/glplpf.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glplpx01.c -o glpk/glplpx01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glplpx02.c -o glpk/glplpx02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glplpx03.c -o glpk/glplpx03.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpluf.c -o glpk/glpluf.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glplux.c -o glpk/glplux.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpmat.c -o glpk/glpmat.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpmpl01.c -o glpk/glpmpl01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpmpl02.c -o glpk/glpmpl02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpmpl03.c -o glpk/glpmpl03.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpmpl04.c -o glpk/glpmpl04.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpmpl05.c -o glpk/glpmpl05.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpmpl06.c -o glpk/glpmpl06.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpmps.c -o glpk/glpmps.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet01.c -o glpk/glpnet01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet02.c -o glpk/glpnet02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet03.c -o glpk/glpnet03.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet04.c -o glpk/glpnet04.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet05.c -o glpk/glpnet05.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet06.c -o glpk/glpnet06.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet07.c -o glpk/glpnet07.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet08.c -o glpk/glpnet08.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnet09.c -o glpk/glpnet09.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnpp01.c -o glpk/glpnpp01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnpp02.c -o glpk/glpnpp02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnpp03.c -o glpk/glpnpp03.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnpp04.c -o glpk/glpnpp04.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpnpp05.c -o glpk/glpnpp05.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpqmd.c -o glpk/glpqmd.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glprgr.c -o glpk/glprgr.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glprng01.c -o glpk/glprng01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glprng02.c -o glpk/glprng02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpscf.c -o glpk/glpscf.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpscl.c -o glpk/glpscl.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpsdf.c -o glpk/glpsdf.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpspm.c -o glpk/glpspm.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpspx01.c -o glpk/glpspx01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpspx02.c -o glpk/glpspx02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpsql.c -o glpk/glpsql.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpssx01.c -o glpk/glpssx01.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glpssx02.c -o glpk/glpssx02.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c glpk/glptsp.c -o glpk/glptsp.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/Color.cpp -o simpleraytracer/Color.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/Light.cpp -o simpleraytracer/Light.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/Point.cpp -o simpleraytracer/Point.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/RIgraphRay.cpp -o simpleraytracer/RIgraphRay.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/Ray.cpp -o simpleraytracer/Ray.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/RayTracer.cpp -o simpleraytracer/RayTracer.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/RayVector.cpp -o simpleraytracer/RayVector.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/Shape.cpp -o simpleraytracer/Shape.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/Sphere.cpp -o simpleraytracer/Sphere.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/Triangle.cpp -o simpleraytracer/Triangle.o
==> default: g++ -I/usr/share/R/include -DNDEBUG -DUSING_R
-DIGRAPH_THREAD_LOCAL=/**/ -DNDEBUG -Iprpack -I. -Iinclude
-DPRPACK_IGRAPH_SUPPORT -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c simpleraytracer/unit_limiter.cpp -o simpleraytracer/unit_limiter.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/R.c -o uuid/R.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/clear.c -o uuid/clear.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/compare.c -o uuid/compare.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/copy.c -o uuid/copy.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/gen_uuid.c -o uuid/gen_uuid.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/isnull.c -o uuid/isnull.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/pack.c -o uuid/pack.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/parse.c -o uuid/parse.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/unpack.c -o uuid/unpack.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c uuid/unparse.c -o uuid/unparse.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c rinterface.c -o rinterface.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c rinterface_extra.c -o rinterface_extra.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DUSING_R -I.
-Iinclude -Ics -Iglpk -Iplfit -ICHOLMOD/Include -IAMD/Include -ICOLAMD/Include
-ISuiteSparse_config -g -O2 -fstack-protector --param=ssp-buffer-size=4
-Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2
-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -I/usr/include/libxml2 -DNDEBUG
-DNPARTITION -DNTIMER -DNCAMD -DNPRINT -DPACKAGE_VERSION=\"@VERSION@\"
-DINTERNAL_ARPACK -DIGRAPH_THREAD_LOCAL=/**/ -fpic -g -O2 -fstack-protector
--param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2
-g -c lazyeval.c -o lazyeval.o
==> default: g++ -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro
-o igraph.so AMD/Source/amd.o AMD/Source/amd_1.o AMD/Source/amd_2.o
AMD/Source/amd_aat.o AMD/Source/amd_control.o AMD/Source/amd_defaults.o
AMD/Source/amd_dump.o AMD/Source/amd_global.o AMD/Source/amd_info.o
AMD/Source/amd_order.o AMD/Source/amd_post_tree.o AMD/Source/amd_postorder.o
AMD/Source/amd_preprocess.o AMD/Source/amd_valid.o AMD/Source/amdbar.o
CHOLMOD/Check/cholmod_check.o CHOLMOD/Check/cholmod_read.o
CHOLMOD/Check/cholmod_write.o CHOLMOD/Cholesky/cholmod_amd.o
CHOLMOD/Cholesky/cholmod_analyze.o CHOLMOD/Cholesky/cholmod_colamd.o
CHOLMOD/Cholesky/cholmod_etree.o CHOLMOD/Cholesky/cholmod_factorize.o
CHOLMOD/Cholesky/cholmod_postorder.o CHOLMOD/Cholesky/cholmod_rcond.o
CHOLMOD/Cholesky/cholmod_resymbol.o CHOLMOD/Cholesky/cholmod_rowcolcounts.o
CHOLMOD/Cholesky/cholmod_rowfac.o CHOLMOD/Cholesky/cholmod_solve.o
CHOLMOD/Cholesky/cholmod_spsolve.o CHOLMOD/Core/cholmod_aat.o
CHOLMOD/Core/cholmod_add.o CHOLMOD/Core/cholmod_ban
==> default: d.o CHOLMOD/Core/cholmod_change_factor.o
CHOLMOD/Core/cholmod_common.o CHOLMOD/Core/cholmod_complex.o
CHOLMOD/Core/cholmod_copy.o CHOLMOD/Core/cholmod_dense.o
CHOLMOD/Core/cholmod_error.o CHOLMOD/Core/cholmod_factor.o
CHOLMOD/Core/cholmod_memory.o CHOLMOD/Core/cholmod_sparse.o
CHOLMOD/Core/cholmod_transpose.o CHOLMOD/Core/cholmod_triplet.o
CHOLMOD/Core/cholmod_version.o CHOLMOD/MatrixOps/cholmod_drop.o
CHOLMOD/MatrixOps/cholmod_horzcat.o CHOLMOD/MatrixOps/cholmod_norm.o
CHOLMOD/MatrixOps/cholmod_scale.o CHOLMOD/MatrixOps/cholmod_sdmult.o
CHOLMOD/MatrixOps/cholmod_ssmult.o CHOLMOD/MatrixOps/cholmod_submatrix.o
CHOLMOD/MatrixOps/cholmod_symmetry.o CHOLMOD/MatrixOps/cholmod_vertcat.o
CHOLMOD/Modify/cholmod_rowadd.o CHOLMOD/Modify/cholmod_rowdel.o
CHOLMOD/Modify/cholmod_updown.o CHOLMOD/Partition/cholmod_camd.o
CHOLMOD/Partition/cholmod_ccolamd.o CHOLMOD/Partition/cholmod_csymamd.o
CHOLMOD/Partition/cholmod_metis.o CHOLMOD/Partition/cholmod_nesdis.o
CHOLMOD/Supernodal/cholmod_super_numeric.o CHOLM
==> default: OD/Supernodal/cholmod_super_solve.o
CHOLMOD/Supernodal/cholmod_super_symbolic.o COLAMD/Source/colamd.o
COLAMD/Source/colamd_global.o DensityGrid.o DensityGrid_3d.o NetDataTypes.o
NetRoutines.o SuiteSparse_config/SuiteSparse_config.o adjlist.o arpack.o
array.o atlas.o attributes.o basic_query.o bfgs.o bigint.o bignum.o bipartite.o
blas.o bliss.o bliss_eqrefhash.o bliss_graph.o bliss_heap.o bliss_orbit.o
bliss_partition.o bliss_timer.o bliss_utils.o cattributes.o centrality.o
cliques.o clustertool.o cocitation.o cohesive_blocks.o community.o complex.o
components.o conversion.o cores.o cs/cs_add.o cs/cs_amd.o cs/cs_chol.o
cs/cs_cholsol.o cs/cs_compress.o cs/cs_counts.o cs/cs_cumsum.o cs/cs_dfs.o
cs/cs_dmperm.o cs/cs_droptol.o cs/cs_dropzeros.o cs/cs_dupl.o cs/cs_entry.o
cs/cs_ereach.o cs/cs_etree.o cs/cs_fkeep.o cs/cs_gaxpy.o cs/cs_happly.o
cs/cs_house.o cs/cs_ipvec.o cs/cs_leaf.o cs/cs_load.o cs/cs_lsolve.o
cs/cs_ltsolve.o cs/cs_lu.o cs/cs_lusol.o cs/cs_malloc.o cs/cs_maxtrans.o
cs/cs_multiply.o
==> default: cs/cs_norm.o cs/cs_permute.o cs/cs_pinv.o cs/cs_post.o
cs/cs_print.o cs/cs_pvec.o cs/cs_qr.o cs/cs_qrsol.o cs/cs_randperm.o
cs/cs_reach.o cs/cs_scatter.o cs/cs_scc.o cs/cs_schol.o cs/cs_spsolve.o
cs/cs_sqr.o cs/cs_symperm.o cs/cs_tdfs.o cs/cs_transpose.o cs/cs_updown.o
cs/cs_usolve.o cs/cs_util.o cs/cs_utsolve.o decomposition.o distances.o
dotproduct.o dqueue.o drl_graph.o drl_graph_3d.o drl_layout.o drl_layout_3d.o
drl_parse.o eigen.o embedding.o fast_community.o feedback_arc_set.o flow.o
foreign-dl-lexer.o foreign-dl-parser.o foreign-gml-lexer.o foreign-gml-parser.o
foreign-graphml.o foreign-lgl-lexer.o foreign-lgl-parser.o foreign-ncol-lexer.o
foreign-ncol-parser.o foreign-pajek-lexer.o foreign-pajek-parser.o foreign.o
forestfire.o fortran_intrinsics.o games.o gengraph_box_list.o
gengraph_degree_sequence.o gengraph_graph_molloy_hash.o
gengraph_graph_molloy_optimized.o gengraph_mr-connected.o gengraph_powerlaw.o
gengraph_random.o glet.o glpk_support.o gml_tree.o hacks.o heap.o igraph_bucket
==> default: s.o igraph_error.o igraph_estack.o igraph_fixed_vectorlist.o
igraph_grid.o igraph_hashtable.o igraph_heap.o igraph_hrg.o igraph_hrg_types.o
igraph_marked_queue.o igraph_psumtree.o igraph_set.o igraph_stack.o
igraph_strvector.o igraph_trie.o infomap.o infomap_FlowGraph.o infomap_Greedy.o
infomap_Node.o interrupt.o iterators.o lad.o lapack.o layout.o layout_dh.o
layout_fr.o layout_gem.o layout_kk.o lsap.o matching.o math.o matrix.o
maximal_cliques.o memory.o microscopic_update.o mixing.o motifs.o operators.o
optimal_modularity.o other.o paths.o plfit/error.o plfit/gss.o
plfit/kolmogorov.o plfit/lbfgs.o plfit/options.o plfit/plfit.o plfit/zeta.o
pottsmodel_2.o progress.o prpack.o prpack/prpack_base_graph.o
prpack/prpack_igraph_graph.o prpack/prpack_preprocessed_ge_graph.o
prpack/prpack_preprocessed_gs_graph.o prpack/prpack_preprocessed_scc_graph.o
prpack/prpack_preprocessed_schur_graph.o prpack/prpack_result.o
prpack/prpack_solver.o prpack/prpack_utils.o qsort.o qsort_r.o random.o
random_walk.o s
==> default: bm.o scan.o scg.o scg_approximate_methods.o scg_exact_scg.o
scg_kmeans.o scg_optimal_method.o scg_utils.o separators.o sir.o
spanning_trees.o sparsemat.o spectral_properties.o spmatrix.o st-cuts.o
statusbar.o structural_properties.o structure_generators.o sugiyama.o
topology.o triangles.o type_indexededgelist.o types.o vector.o vector_ptr.o
version.o visitors.o walktrap.o walktrap_communities.o walktrap_graph.o
walktrap_heap.o zeroin.o dgetv0.o dlaqrb.o dmout.o dnaitr.o dnapps.o dnaup2.o
dnaupd.o dnconv.o dneigh.o dneupd.o dngets.o dsaitr.o dsapps.o dsaup2.o
dsaupd.o dsconv.o dseigt.o dsesrt.o dseupd.o dsgets.o dsortc.o dsortr.o
dstatn.o dstats.o dstqrb.o dvout.o ivout.o second.o glpk/amd/amd_1.o
glpk/amd/amd_2.o glpk/amd/amd_aat.o glpk/amd/amd_control.o
glpk/amd/amd_defaults.o glpk/amd/amd_dump.o glpk/amd/amd_info.o
glpk/amd/amd_order.o glpk/amd/amd_post_tree.o glpk/amd/amd_postorder.o
glpk/amd/amd_preprocess.o glpk/amd/amd_valid.o glpk/colamd/colamd.o
glpk/glpapi01.o glpk/glpapi02.o glpk/glp
==> default: api03.o glpk/glpapi04.o glpk/glpapi05.o glpk/glpapi06.o
glpk/glpapi07.o glpk/glpapi08.o glpk/glpapi09.o glpk/glpapi10.o glpk/glpapi11.o
glpk/glpapi12.o glpk/glpapi13.o glpk/glpapi14.o glpk/glpapi15.o glpk/glpapi16.o
glpk/glpapi17.o glpk/glpapi18.o glpk/glpapi19.o glpk/glpavl.o glpk/glpbfd.o
glpk/glpbfx.o glpk/glpcpx.o glpk/glpdmp.o glpk/glpdmx.o glpk/glpenv01.o
glpk/glpenv02.o glpk/glpenv03.o glpk/glpenv04.o glpk/glpenv05.o glpk/glpenv06.o
glpk/glpenv07.o glpk/glpenv08.o glpk/glpfhv.o glpk/glpgmp.o glpk/glphbm.o
glpk/glpini01.o glpk/glpini02.o glpk/glpios01.o glpk/glpios02.o glpk/glpios03.o
glpk/glpios04.o glpk/glpios05.o glpk/glpios06.o glpk/glpios07.o glpk/glpios08.o
glpk/glpios09.o glpk/glpios10.o glpk/glpios11.o glpk/glpios12.o glpk/glpipm.o
glpk/glplib01.o glpk/glplib02.o glpk/glplib03.o glpk/glplpf.o glpk/glplpx01.o
glpk/glplpx02.o glpk/glplpx03.o glpk/glpluf.o glpk/glplux.o glpk/glpmat.o
glpk/glpmpl01.o glpk/glpmpl02.o glpk/glpmpl03.o glpk/glpmpl04.o glpk/glpmpl05.o
glpk/glpmpl06.o glpk
==> default: /glpmps.o glpk/glpnet01.o glpk/glpnet02.o glpk/glpnet03.o
glpk/glpnet04.o glpk/glpnet05.o glpk/glpnet06.o glpk/glpnet07.o glpk/glpnet08.o
glpk/glpnet09.o glpk/glpnpp01.o glpk/glpnpp02.o glpk/glpnpp03.o glpk/glpnpp04.o
glpk/glpnpp05.o glpk/glpqmd.o glpk/glprgr.o glpk/glprng01.o glpk/glprng02.o
glpk/glpscf.o glpk/glpscl.o glpk/glpsdf.o glpk/glpspm.o glpk/glpspx01.o
glpk/glpspx02.o glpk/glpsql.o glpk/glpssx01.o glpk/glpssx02.o glpk/glptsp.o
simpleraytracer/Color.o simpleraytracer/Light.o simpleraytracer/Point.o
simpleraytracer/RIgraphRay.o simpleraytracer/Ray.o simpleraytracer/RayTracer.o
simpleraytracer/RayVector.o simpleraytracer/Shape.o simpleraytracer/Sphere.o
simpleraytracer/Triangle.o simpleraytracer/unit_limiter.o uuid/R.o uuid/clear.o
uuid/compare.o uuid/copy.o uuid/gen_uuid.o uuid/isnull.o uuid/pack.o
uuid/parse.o uuid/unpack.o uuid/unparse.o rinterface.o rinterface_extra.o
lazyeval.o -lxml2 -lgfortran -lm -lquadmath -llapack -lblas -lgfortran -lm
-lquadmath -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/igraph/libs
==> default: ** R
==> default: ** demo
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** testing if installed package can be loaded
==> default: * DONE (igraph)
==> default: * installing *source* package âBiRewireâ ...
==> default: ** libs
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c BiRewire.c -o BiRewire.o
==> default: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security
-D_FORTIFY_SOURCE=2 -g -c interface.c -o interface.o
==> default: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions
-Wl,-z,relro -o BiRewire.so BiRewire.o interface.o -L/usr/lib/R/lib -lR
==> default: installing to /usr/local/lib/R/site-library/BiRewire/libs
==> default: ** R
==> default: ** data
==> default: ** inst
==> default: ** preparing package for lazy loading
==> default: ** help
==> default: *** installing help indices
==> default: ** building package indices
==> default: ** installing vignettes
==> default: ** testing if installed package can be loaded
==> default: * DONE (BiRewire)
==> default: The downloaded source packages are in
==> default: â/tmp/RtmpfpMOc5/downloaded_packagesâ
==> default: Old packages: 'colorspace', 'DBI', 'digest', 'evaluate',
'labeling', 'munsell',
==> default: 'plyr', 'RColorBrewer', 'RCurl', 'reshape', 'rjson', 'RMySQL',
'scales',
==> default: 'stringr', 'testthat', 'xtable', 'zoo', 'boot', 'MASS', 'mgcv',
'spatial',
==> default: 'survival'
==> default: Warning:
==> default: dependencies âRcampdfâ, âRgraphvizâ,
âtm.lexicon.GeneralInquirerâ, âGenomicRangesâ are not available
==> default: also installing the dependencies âminqaâ, ânloptrâ,
âRcppEigenâ, âmodeltoolsâ, âDBIâ, âlme4â, âSparseMâ,
âMatrixModelsâ, âmclustâ, âflexmixâ, âprabclusâ, âdiptestâ,
âkernlabâ, âtrimclusterâ, âDEoptimRâ, âhtmlwidgetsâ,
âviridisLiteâ, âtidyrâ, âdplyrâ, âpurrrâ, âpbkrtestâ,
âquantregâ, âbackportsâ, âfpcâ, âviridisâ, ârobustbaseâ,
âcodaâ, âtrustâ, âlpSolveâ, âanimationâ, âbase64â,
âdeSolveâ, âapeâ, âmvtnormâ, âabindâ, âevaluateâ,
âhighrâ, âscatterplot3dâ, âvcdâ, âDTâ, âplotlyâ, âbitâ,
âRcppCCTZâ, âgtoolsâ, âcarâ, âModelMetricsâ, âFormulaâ,
âbdsmatrixâ, âsandwichâ, âlmtestâ, âcaToolsâ, âbase64encâ,
ârprojrootâ, ârexâ, âfontBitstreamVeraâ, âfontLiberationâ,
âopensslâ, âstringdistâ, âbrewâ, âdescâ, âcommonmarkâ,
âTSPâ, âqapâ, âgclusâ, âdendextendâ, âgplotsâ, âtergmâ,
âergm.countâ, âsnaâ, âstatnet.commonâ, ânetworkâ,
ânetworkDynamicâ, âergmâ, ânetworksisâ, âdegreenetâ,
âreleventâ, ândtvâ, âEpiModelâ, âlatentnetâ, âtsnaâ,
âNLPâ, âBHâ, âfilehashâ, âRpopplerâ, âSnowballCâ,
âXMLâ, âgetoptâ, âknitrâ, âpmmlâ, âarulesVizâ, âbit64â,
ânanotimeâ, âchronâ, âhexbinâ, âfastmatchâ, âgdataâ,
âcaretâ, âcurlâ, âplmâ, ârmarkdownâ, âcovrâ, ârJavaâ,
âgdtoolsâ, âhtmltoolsâ, âxml2â, âfontquiverâ, âmimeâ,
âjsonliteâ, âR6â, âsourcetoolsâ, âCairoâ, âmarkdownâ,
âproxyâ, âhttrâ, âmemoiseâ, âwhiskerâ, ârstudioapiâ,
âgit2râ, âwithrâ, âcrayonâ, âhunspellâ, âlintrâ,
âroxygen2â, ârversionsâ, âgmailrâ, âseriationâ, âsvUnitâ
==> default: Providing id_service
==> default: integration-scripts/install_codeface_node.sh: 8:
integration-scripts/install_codeface_node.sh:
==> default: npm: not found
==> default: Providing codeface python
==> default: In file included from _mysql.c:44:0:
==> default: /usr/include/mysql/my_config.h:423:0: warning: "HAVE_WCSCOLL"
redefined [enabled by default]
==> default: #define HAVE_WCSCOLL
==> default: ^
==> default: In file included from /usr/include/python2.7/pyconfig.h:3:0,
==> default: from /usr/include/python2.7/Python.h:8,
==> default: from _mysql.c:29:
==> default: /usr/include/x86_64-linux-gnu/python2.7/pyconfig.h:911:0: note:
this is the location of the previous definition
==> default: #define HAVE_WCSCOLL 1
==> default: ^
==> default: zip_safe flag not set; analyzing archive contents...
==> default: src/_readtags.c: In function
â__pyx_pf_9_readtags_8TagEntry___getitem__â:
==> default: src/_readtags.c:957:20: warning: assignment discards âconstâ
qualifier from pointer target type [enabled by default]
==> default: __pyx_v_result = tagsField((&((struct
__pyx_obj_9_readtags_TagEntry *)__pyx_v_self)->c_entry), __pyx_3);
==> default: ^
==> default: zip_safe flag not set; analyzing archive contents...
==> default: warning: no previously-included files matching '*' found under
directory 'docs/build'
==> default: zip_safe flag not set; analyzing archive contents...
==> default: Providing cppstats 0.9.3
==> default: /vagrant /vagrant
==> default: cppstats-0.9.3/
==> default: cppstats-0.9.3/.gitignore
==> default: cppstats-0.9.3/INSTALL.md
==> default: cppstats-0.9.3/LICENSE
==> default: cppstats-0.9.3/LICENSE.LESSER
==> default: cppstats-0.9.3/OLD_BRANCHES
==> default: cppstats-0.9.3/README.md
==> default: cppstats-0.9.3/analyses/
==> default: cppstats-0.9.3/analyses/__init__.py
==> default: cppstats-0.9.3/analyses/derivative.py
==> default: cppstats-0.9.3/analyses/discipline.py
==> default: cppstats-0.9.3/analyses/featurelocations.py
==> default: cppstats-0.9.3/analyses/general.py
==> default: cppstats-0.9.3/analyses/generalvalues.py
==> default: cppstats-0.9.3/analyses/interaction.py
==> default: cppstats-0.9.3/cppstats.sh
==> default: cppstats-0.9.3/cppstats/
==> default: cppstats-0.9.3/cppstats/__init__.py
==> default: cppstats-0.9.3/cppstats/analysis.py
==> default: cppstats-0.9.3/cppstats/cli.py
==> default: cppstats-0.9.3/cppstats/cppstats.py
==> default: cppstats-0.9.3/cppstats/preparation.py
==> default: cppstats-0.9.3/cppstats_input.txt
==> default: cppstats-0.9.3/lib/
==> default: cppstats-0.9.3/lib/__init__.py
==> default: cppstats-0.9.3/lib/cpplib.py
==> default: cppstats-0.9.3/preparations/
==> default: cppstats-0.9.3/preparations/__init__.py
==> default: cppstats-0.9.3/preparations/deleteComments.xsl
==> default: cppstats-0.9.3/preparations/deleteIncludeGuards.py
==> default: cppstats-0.9.3/preparations/rewriteIfdefs.py
==> default: cppstats-0.9.3/preparations/rewriteMultilineMacros.py
==> default: cppstats-0.9.3/scripts/
==> default: cppstats-0.9.3/scripts/__init__.py
==> default: cppstats-0.9.3/scripts/ascope.py
==> default: cppstats-0.9.3/scripts/convert2xml.sh
==> default: cppstats-0.9.3/scripts/disable_errorneous_files.sh
==> default: cppstats-0.9.3/scripts/ifdefendifratio.py
==> default: cppstats-0.9.3/scripts/partial_preprocessor.py
==> default: cppstats-0.9.3/scripts/reversecpp.py
==> default: cppstats-0.9.3/setup.py
==> default: running install
==> default: running bdist_egg
==> default: running egg_info
==> default: creating cppstats.egg-info
==> default: writing requirements to cppstats.egg-info/requires.txt
==> default: writing cppstats.egg-info/PKG-INFO
==> default: writing top-level names to cppstats.egg-info/top_level.txt
==> default: writing dependency_links to cppstats.egg-info/dependency_links.txt
==> default: writing entry points to cppstats.egg-info/entry_points.txt
==> default: writing manifest file 'cppstats.egg-info/SOURCES.txt'
==> default: reading manifest file 'cppstats.egg-info/SOURCES.txt'
==> default: writing manifest file 'cppstats.egg-info/SOURCES.txt'
==> default: installing library code to build/bdist.linux-x86_64/egg
==> default: running install_lib
==> default: running build_py
==> default: creating build
==> default: creating build/lib.linux-x86_64-2.7
==> default: creating build/lib.linux-x86_64-2.7/preparations
==> default: copying preparations/deleteIncludeGuards.py ->
build/lib.linux-x86_64-2.7/preparations
==> default: copying preparations/rewriteMultilineMacros.py ->
build/lib.linux-x86_64-2.7/preparations
==> default: copying preparations/__init__.py ->
build/lib.linux-x86_64-2.7/preparations
==> default: copying preparations/rewriteIfdefs.py ->
build/lib.linux-x86_64-2.7/preparations
==> default: creating build/lib.linux-x86_64-2.7/cppstats
==> default: copying cppstats/cppstats.py -> build/lib.linux-x86_64-2.7/cppstats
==> default: copying cppstats/cli.py -> build/lib.linux-x86_64-2.7/cppstats
==> default: copying cppstats/__init__.py -> build/lib.linux-x86_64-2.7/cppstats
==> default: copying cppstats/analysis.py -> build/lib.linux-x86_64-2.7/cppstats
==> default: copying cppstats/preparation.py ->
build/lib.linux-x86_64-2.7/cppstats
==> default: creating build/lib.linux-x86_64-2.7/lib
==> default: copying lib/cpplib.py -> build/lib.linux-x86_64-2.7/lib
==> default: copying lib/__init__.py -> build/lib.linux-x86_64-2.7/lib
==> default: creating build/lib.linux-x86_64-2.7/analyses
==> default: copying analyses/generalvalues.py ->
build/lib.linux-x86_64-2.7/analyses
==> default: copying analyses/derivative.py ->
build/lib.linux-x86_64-2.7/analyses
==> default: copying analyses/discipline.py ->
build/lib.linux-x86_64-2.7/analyses
==> default: copying analyses/featurelocations.py ->
build/lib.linux-x86_64-2.7/analyses
==> default: copying analyses/interaction.py ->
build/lib.linux-x86_64-2.7/analyses
==> default: copying analyses/general.py -> build/lib.linux-x86_64-2.7/analyses
==> default: copying analyses/__init__.py -> build/lib.linux-x86_64-2.7/analyses
==> default: copying preparations/deleteComments.xsl ->
build/lib.linux-x86_64-2.7/preparations
==> default: creating build/bdist.linux-x86_64
==> default: creating build/bdist.linux-x86_64/egg
==> default: creating build/bdist.linux-x86_64/egg/preparations
==> default: copying
build/lib.linux-x86_64-2.7/preparations/deleteIncludeGuards.py ->
build/bdist.linux-x86_64/egg/preparations
==> default: copying
build/lib.linux-x86_64-2.7/preparations/rewriteMultilineMacros.py ->
build/bdist.linux-x86_64/egg/preparations
==> default: copying build/lib.linux-x86_64-2.7/preparations/deleteComments.xsl
-> build/bdist.linux-x86_64/egg/preparations
==> default: copying build/lib.linux-x86_64-2.7/preparations/__init__.py ->
build/bdist.linux-x86_64/egg/preparations
==> default: copying build/lib.linux-x86_64-2.7/preparations/rewriteIfdefs.py
-> build/bdist.linux-x86_64/egg/preparations
==> default: creating build/bdist.linux-x86_64/egg/cppstats
==> default: copying build/lib.linux-x86_64-2.7/cppstats/cppstats.py ->
build/bdist.linux-x86_64/egg/cppstats
==> default: copying build/lib.linux-x86_64-2.7/cppstats/cli.py ->
build/bdist.linux-x86_64/egg/cppstats
==> default: copying build/lib.linux-x86_64-2.7/cppstats/__init__.py ->
build/bdist.linux-x86_64/egg/cppstats
==> default: copying build/lib.linux-x86_64-2.7/cppstats/analysis.py ->
build/bdist.linux-x86_64/egg/cppstats
==> default: copying build/lib.linux-x86_64-2.7/cppstats/preparation.py ->
build/bdist.linux-x86_64/egg/cppstats
==> default: creating build/bdist.linux-x86_64/egg/lib
==> default: copying build/lib.linux-x86_64-2.7/lib/cpplib.py ->
build/bdist.linux-x86_64/egg/lib
==> default: copying build/lib.linux-x86_64-2.7/lib/__init__.py ->
build/bdist.linux-x86_64/egg/lib
==> default: creating build/bdist.linux-x86_64/egg/analyses
==> default: copying build/lib.linux-x86_64-2.7/analyses/generalvalues.py ->
build/bdist.linux-x86_64/egg/analyses
==> default: copying build/lib.linux-x86_64-2.7/analyses/derivative.py ->
build/bdist.linux-x86_64/egg/analyses
==> default: copying build/lib.linux-x86_64-2.7/analyses/discipline.py ->
build/bdist.linux-x86_64/egg/analyses
==> default: copying build/lib.linux-x86_64-2.7/analyses/featurelocations.py ->
build/bdist.linux-x86_64/egg/analyses
==> default: copying build/lib.linux-x86_64-2.7/analyses/interaction.py ->
build/bdist.linux-x86_64/egg/analyses
==> default: copying build/lib.linux-x86_64-2.7/analyses/general.py ->
build/bdist.linux-x86_64/egg/analyses
==> default: copying build/lib.linux-x86_64-2.7/analyses/__init__.py ->
build/bdist.linux-x86_64/egg/analyses
==> default: byte-compiling
build/bdist.linux-x86_64/egg/preparations/deleteIncludeGuards.py to
deleteIncludeGuards.pyc
==> default: byte-compiling
build/bdist.linux-x86_64/egg/preparations/rewriteMultilineMacros.py to
rewriteMultilineMacros.pyc
==> default: byte-compiling
build/bdist.linux-x86_64/egg/preparations/__init__.py to __init__.pyc
==> default: byte-compiling
build/bdist.linux-x86_64/egg/preparations/rewriteIfdefs.py to rewriteIfdefs.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/cppstats/cppstats.py
to cppstats.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/cppstats/cli.py to
cli.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/cppstats/__init__.py
to __init__.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/cppstats/analysis.py
to analysis.pyc
==> default: byte-compiling
build/bdist.linux-x86_64/egg/cppstats/preparation.py to preparation.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/lib/cpplib.py to
cpplib.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/lib/__init__.py to
__init__.pyc
==> default: byte-compiling
build/bdist.linux-x86_64/egg/analyses/generalvalues.py to generalvalues.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/analyses/derivative.py
to derivative.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/analyses/discipline.py
to discipline.pyc
==> default: byte-compiling
build/bdist.linux-x86_64/egg/analyses/featurelocations.py to
featurelocations.pyc
==> default: byte-compiling
build/bdist.linux-x86_64/egg/analyses/interaction.py to interaction.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/analyses/general.py to
general.pyc
==> default: byte-compiling build/bdist.linux-x86_64/egg/analyses/__init__.py
to __init__.pyc
==> default: creating build/bdist.linux-x86_64/egg/EGG-INFO
==> default: copying cppstats.egg-info/PKG-INFO ->
build/bdist.linux-x86_64/egg/EGG-INFO
==> default: copying cppstats.egg-info/SOURCES.txt ->
build/bdist.linux-x86_64/egg/EGG-INFO
==> default: copying cppstats.egg-info/dependency_links.txt ->
build/bdist.linux-x86_64/egg/EGG-INFO
==> default: copying cppstats.egg-info/entry_points.txt ->
build/bdist.linux-x86_64/egg/EGG-INFO
==> default: copying cppstats.egg-info/requires.txt ->
build/bdist.linux-x86_64/egg/EGG-INFO
==> default: copying cppstats.egg-info/top_level.txt ->
build/bdist.linux-x86_64/egg/EGG-INFO
==> default: zip_safe flag not set; analyzing archive contents...
==> default: cppstats.preparation: module references __file__
==> default: creating dist
==> default: creating 'dist/cppstats-0.9.3-py2.7.egg' and adding
'build/bdist.linux-x86_64/egg' to it
==> default: removing 'build/bdist.linux-x86_64/egg' (and everything under it)
==> default: Processing cppstats-0.9.3-py2.7.egg
==> default: creating
/usr/local/lib/python2.7/dist-packages/cppstats-0.9.3-py2.7.egg
==> default: Extracting cppstats-0.9.3-py2.7.egg to
/usr/local/lib/python2.7/dist-packages
==> default: Adding cppstats 0.9.3 to easy-install.pth file
==> default: Installing cppstats script to /usr/local/bin
==> default: Installing cppstats.analysis script to /usr/local/bin
==> default: Installing cppstats.preparation script to /usr/local/bin
==> default:
==> default: Installed
/usr/local/lib/python2.7/dist-packages/cppstats-0.9.3-py2.7.egg
==> default: Processing dependencies for cppstats==0.9.3
==> default: Searching for lxml>=3.4
==> default: Reading
https://pypi.python.org/simple/lxml/
==> default: Downloading
https://pypi.python.org/packages/39/e8/a8e0b1fa65dd021d48fe21464f71783655f39a41f218293c1c590d54eb82/lxml-3.7.3.tar.gz#md5=075692ce442e69bbd604d44e21c02753
==> default: Best match: lxml 3.7.3
==> default: Processing lxml-3.7.3.tar.gz
==> default: Writing /tmp/easy_install-phYybr/lxml-3.7.3/setup.cfg
==> default: Running lxml-3.7.3/setup.py -q bdist_egg --dist-dir
/tmp/easy_install-phYybr/lxml-3.7.3/egg-dist-tmp-Ygskkr
==> default: Building lxml version 3.7.3.
==> default: Building without Cython.
==> default: Using build configuration of libxslt 1.1.28
==> default: creating
/usr/local/lib/python2.7/dist-packages/lxml-3.7.3-py2.7-linux-x86_64.egg
==> default: Extracting lxml-3.7.3-py2.7-linux-x86_64.egg to
/usr/local/lib/python2.7/dist-packages
==> default: Adding lxml 3.7.3 to easy-install.pth file
==> default:
==> default: Installed
/usr/local/lib/python2.7/dist-packages/lxml-3.7.3-py2.7-linux-x86_64.egg
==> default: Searching for enum
==> default: Reading
https://pypi.python.org/simple/enum/
==> default: Downloading
https://pypi.python.org/packages/0c/4e/1ea357e7783c756bb579333c1e4a026fb331371ee771f616ffedc781e531/enum-0.4.6.tar.gz#md5=173d468112cfa13a149b2c8af3e8fd52
==> default: Best match: enum 0.4.6
==> default: Processing enum-0.4.6.tar.gz
==> default: Writing /tmp/easy_install-WpfdoE/enum-0.4.6/setup.cfg
==> default: Running enum-0.4.6/setup.py -q bdist_egg --dist-dir
/tmp/easy_install-WpfdoE/enum-0.4.6/egg-dist-tmp-6fdo0b
==> default: creating
/usr/local/lib/python2.7/dist-packages/enum-0.4.6-py2.7.egg
==> default: Extracting enum-0.4.6-py2.7.egg to
/usr/local/lib/python2.7/dist-packages
==> default: Adding enum 0.4.6 to easy-install.pth file
==> default:
==> default: Installed
/usr/local/lib/python2.7/dist-packages/enum-0.4.6-py2.7.egg
==> default: Searching for statlib==1.2
==> default: Downloading
https://github.com/clhunsen/python-statlib/archive/release-1.2.tar.gz#egg=statlib-1.2
==> default: Best match: statlib 1.2
==> default: Processing release-1.2.tar.gz
==> default: Writing
/tmp/easy_install-F9ebd4/python-statlib-release-1.2/setup.cfg
==> default: Running python-statlib-release-1.2/setup.py -q bdist_egg
--dist-dir
/tmp/easy_install-F9ebd4/python-statlib-release-1.2/egg-dist-tmp-an4QqD
==> default: warning: no files found matching '*.html' under directory 'docs'
==> default: zip_safe flag not set; analyzing archive contents...
==> default: Moving statlib-1.2-py2.7.egg to
/usr/local/lib/python2.7/dist-packages
==> default: Adding statlib 1.2 to easy-install.pth file
==> default:
==> default: Installed
/usr/local/lib/python2.7/dist-packages/statlib-1.2-py2.7.egg
==> default: Searching for pyparsing==2.1.10
==> default: Best match: pyparsing 2.1.10
==> default: Adding pyparsing 2.1.10 to easy-install.pth file
==> default:
==> default: Using /usr/local/lib/python2.7/dist-packages
==> default: Searching for setuptools==34.3.1
==> default: Best match: setuptools 34.3.1
==> default: Adding setuptools 34.3.1 to easy-install.pth file
==> default: Installing easy_install script to /usr/local/bin
==> default: Installing easy_install-3.6 script to /usr/local/bin
==> default:
==> default: Using /usr/local/lib/python2.7/dist-packages
==> default: Searching for six==1.10.0
==> default: Best match: six 1.10.0
==> default: Adding six 1.10.0 to easy-install.pth file
==> default:
==> default: Using /usr/local/lib/python2.7/dist-packages
==> default: Searching for packaging==16.8
==> default: Best match: packaging 16.8
==> default: Adding packaging 16.8 to easy-install.pth file
==> default:
==> default: Using /usr/local/lib/python2.7/dist-packages
==> default: Searching for appdirs==1.4.2
==> default: Best match: appdirs 1.4.2
==> default: Adding appdirs 1.4.2 to easy-install.pth file
==> default:
==> default: Using /usr/local/lib/python2.7/dist-packages
==> default: Finished processing dependencies for cppstats==0.9.3
==> default: Providing srcML
==> default: Selecting previously unselected package srcml.
==> default: (Reading database ... 99887 files and directories currently
installed.)
==> default: Preparing to unpack /tmp/tmp.cF6ktSKW5H/srcML.deb ...
==> default: Unpacking srcml (0.9.5) ...
==> default: Setting up srcml (0.9.5) ...
==> default: /vagrant
==> default: Providing codeface database
==> default: Running provisioner: test (shell)...
default: Running: inline script
==> default: module.js:340
==> default: throw err;
==> default:
==> default:
==> default:
==> default:
==> default:
==> default:
==> default:
==> default:
==> default:
==> default:
==> default: ^
==> default: Error: Cannot find module 'express'
==> default: at Function.Module._resolveFilename (module.js:338:15)
==> default: at Function.Module._load (module.js:280:25)
==> default: at Module.require (module.js:364:17)
==> default: at require (module.js:380:17)
==> default: at Object.<anonymous> (/vagrant/id_service/id_service.js:19:15)
==> default: at Module._compile (module.js:456:26)
==> default: at Object.Module._extensions..js (module.js:474:10)
==> default: at Module.load (module.js:356:32)
==> default: at Function.Module._load (module.js:312:12)
==> default: at Function.Module.runMain (module.js:497:10)
==> default: Traceback (most recent call last):
==> default: File "/usr/local/bin/codeface", line 11, in <module>
==> default:
==> default: load_entry_point('codeface', 'console_scripts', 'codeface')()
==> default: File
"/usr/local/lib/python2.7/dist-packages/pkg_resources/__init__.py", line 560,
in load_entry_point
==> default:
==> default: return get_distribution(dist).load_entry_point(group, name)
==> default: File
"/usr/local/lib/python2.7/dist-packages/pkg_resources/__init__.py", line 2648,
in load_entry_point
==> default:
==> default: return ep.load()
==> default: File
"/usr/local/lib/python2.7/dist-packages/pkg_resources/__init__.py", line 2302,
in load
==> default:
==> default: return self.resolve()
==> default: File
"/usr/local/lib/python2.7/dist-packages/pkg_resources/__init__.py", line 2308,
in resolve
==> default:
==> default: module = __import__(self.module_name, fromlist=['__name__'],
level=0)
==> default: ImportError
==> default: :
==> default: No module named codeface.cli
==> default: integration-scripts/test_codeface.sh: line 12: kill: (11306) - No
such process
Other related posts:
