[rmaexpress_help] == Help to read in CEL file in RMAExpress ==
- From: Mingqi Wu <mqwu@xxxxxxxxxxxxx>
- To: rmaexpress_help@xxxxxxxxxxxxx
- Date: Sun, 08 Jul 2007 18:52:43 -0500
Dear All,
I am new to RMAexpress. I am trying to use RMAExpress to normalize CEL
data file from Affymetrix GeneChip microarrays.
I have installed RMAExpress 0.5 on my windows XP, however I met 2 problem:
1. I can not load CEL file: File -> Read Unprocess Files -> CDF files
(there is only one option for CDF file, no CEL option)
2. I tried to convert the CEL file with RMADataConv. I first choose CEL
File Dir, then set Output dir and choose Convert, it always saying could
not read CEL file.
By the way, I use a public CEL file from following link:
http://transcriptome.affymetrix.com/publication/tfbs/
*Transcription Factor Binding Sites Data*
* Raw CEL Data
<http://transcriptome.affymetrix.com/download/publication/tfbs_data/intensity/cel.tgz>.
Could you give me some help? is the data problem or RMAexpress prolbem?
Thank you so much.
Sincerely,
-----------
Mingqi Wu
Email: mqwu@xxxxxxxxxxxxx
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- » [rmaexpress_help] Re: == Help to read in CEL file in RMAExpress ==
- [rmaexpress_help] Re: == Help to read in CEL file in RMAExpress ==
- From: Ben Bolstad