[proteamdavis] Re: Analysis portions
- From: Shankar Sankaran <sankar85_s@xxxxxxxxx>
- To: proteamdavis@xxxxxxxxxxxxx
- Date: Fri, 3 Sep 2004 03:30:09 -0700 (PDT)
Hey guys,
I am sending this email because I realize that it is
taking people a lot longer to each of the analyses
than previously expected. So, instead of the twenty
sequences assigned to each person, pick only 10 of
them to analyze. Any 10 of the twenty assigned to you
will be fine.
Shankar
--- Shankar Sankaran <sankar85_s@xxxxxxxxx> wrote:
> Hey guys,
> So I have finally split up the analysis portions.
> Each
> person (Tejal, Nancy, Paul and Me) have twenty files
> to analyze. In the attached text file is each
> person's
> files to analyze. I have grouped together files of
> the
> same sequences. At the top of every group is a PDB
> code that has the sequence as a HELIX as opposed to
> no
> helix. So you can refer to that file when you are
> analyzing a specific group. If it doesn't make
> sense,
> talk to me.
>
> Shankar
>
>
>
> __________________________________
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> -- Attached file included as plaintext by Ecartis --
> -- File: assignations.txt
> -- Desc: assignations.txt
>
> NANCY:
>
> 1A3G
> aaeit.txt:pdb1nva.ent aaeit NO STRUCTURE
> Chain B 63 67
> aaeit.txt:pdb1rrf.ent aaeit NO STRUCTURE
> Chain * 136 140
>
> 1B4U
> *aakaa.txt:pdb1dts.ent aakaa NO STRUCTURE
> Chain * 25 29
> aakaa.txt:pdb1e58.ent aakaa NO STRUCTURE
> Chain A 236 240
> aakaa.txt:pdb1e6y.ent aakaa NO STRUCTURE
> Chain A 1268 1273
>
> 1AV4
> aarnl.txt:pdb1i4n.ent aarnl NO STRUCTURE
> Chain A 96 100
> aarnl.txt:pdb1k73.ent aarnl NO STRUCTURE
> Chain E 203 207
>
> 1BNC
> ackel.txt:pdb1dhp.ent ackel NO STRUCTURE
> Chain B 255 259
> ackel.txt:pdb1ire.ent ackel NO STRUCTURE
> Chain A 79 83
>
> 1CD9
> alegi.txt:pdb1exd.ent alegi NO STRUCTURE
> Chain A 220 224
> alegi.txt:pdb1gnc.ent alegi NO STRUCTURE
> Chain * 92 96
>
> 1B6G
> alier.txt:pdb1bd0.ent alier NO STRUCTURE
> Chain B 150 154
> alier.txt:pdb1f20.ent alier NO STRUCTURE
> Chain A 1046 1050
>
> 1BAN
> aqalg.txt:pdb1a2p.ent aqalg NO STRUCTURE
> Chain A 30 34
> aqalg.txt:pdb1aig.ent aqalg NO STRUCTURE
> Chain M 137 141
> aqalg.txt:pdb1b20.ent aqalg NO STRUCTURE
> Chain A 30 34
>
> 1AD5
> arvga.txt:pdb1kmk.ent arvga NO STRUCTURE
> Chain A 135 139
> arvga.txt:pdb1qff.ent arvga NO STRUCTURE
> Chain A 678 683
>
> 1ACA
> awnel.txt:pdb1nvl.ent awnel NO STRUCTURE
> Chain A 57 61
> awnel.txt:pdb1qgu.ent awnel NO STRUCTURE
> Chain A 469 473
>
>
>
>
> TEJAL:
>
> 1ATI
> deleg.txt:pdb1nyt.ent deleg NO STRUCTURE
> Chain C 174 178
> deleg.txt:pdb1r5a.ent deleg NO STRUCTURE
> Chain A 190 194
>
> 1ACA
> dkveel.txt:pdb1ld4.ent dkveel NO STRUCTURE
> Chain F 1255 1260
> dkveel.txt:pdb1ld4.ent dkveel NO STRUCTURE
> Chain H 4255 4260
> dkveel.txt:pdb1ld4.ent dkveel NO STRUCTURE
> Chain J 5255 5260
>
> 1B70
> ealfa.txt:pdb1fjg.ent ealfa NO STRUCTURE
> Chain B 119 123
> ealfa.txt:pdb1fts.ent ealfa NO STRUCTURE
> Chain * 490 494
>
> 1DHR
> eeasa.txt:pdb1bd0.ent eeasa NO STRUCTURE
> Chain A 112 116
> eeasa.txt:pdb1nvv.ent eeasa NO STRUCTURE
> Chain Q 62 66
>
> 1ACA
> *eelkk.txt:pdb1l8d.ent eelkk NO STRUCTURE
> Chain A 435 439
> eelkk.txt:pdb1nv8.ent eelkk NO STRUCTURE
> Chain A 253 257
> eelkk.txt:pdb1nwh.ent eelkk NO STRUCTURE
> Chain B 62 66
>
> 1A4S
> eevvk.txt:pdb1gyl.ent eevvk NO STRUCTURE
> Chain B 270 274
> eevvk.txt:pdb1smy.ent eevvk NO STRUCTURE
> Chain D 183 187
>
> 1A50
> eklke.txt:pdb1d3v.ent eklke NO STRUCTURE
> Chain A 38 42
> eklke.txt:pdb1e4g.ent eklke NO STRUCTURE
> Chain T 120 124
> eklke.txt:pdb1mh1.ent eklke NO STRUCTURE
> Chain * 127 131
>
> 1ATI
> gvlal.txt:pdb1g61.ent gvlal NO STRUCTURE
> Chain A 2016 2020
> gvlal.txt:pdb1g61.ent gvlal NO STRUCTURE
> Chain B 4016 4020
> gvlal.txt:pdb1ltk.ent gvlal NO STRUCTURE
> Chain A 409 413
>
>
>
>
>
> PAUL:
>
> 1AV8
> elkkk.txt:pdb1d1r.ent elkkk NO STRUCTURE
> Chain A 67 71
> elkkk.txt:pdb1qn0.ent elkkk NO STRUCTURE
> Chain A 96 100
>
> 1AGW
> glard.txt:pdb1r1w.ent glard NO STRUCTURE
> Chain A 1224 1228
> glard.txt:pdb1t46.ent glard NO STRUCTURE
> Chain A 812 816
>
> 1A71
> iaeaa.txt:pdb1g3i.ent iaeaa NO STRUCTURE
> Chain X 377 381
> iaeaa.txt:pdb1kmi.ent iaeaa NO STRUCTURE
> Chain Z 41 45
> iaeaa.txt:pdb1poi.ent iaeaa NO STRUCTURE
> Chain A 201 205
>
> 1CRX
> iaynt.txt:pdb1kbu.ent iaynt NO STRUCTURE
> Chain A 166 170
> iaynt.txt:pdb1nrh.ent iaynt NO STRUCTURE
> Chain X 331 335
>
> 1A17
> laenr.txt:pdb1gyl.ent laenr NO STRUCTURE
> Chain A 35 39
> laenr.txt:pdb1lyv.ent laenr NO STRUCTURE
> Chain A 274 278
> laenr.txt:pdb1pa9.ent laenr NO STRUCTURE
> Chain A 112 116
>
> 1CG4
> lckqg.txt:pdb1juy.ent lckqg NO STRUCTURE
> Chain * 290 294
> lckqg.txt:pdb1ks9.ent lckqg NO STRUCTURE
> Chain A 19 23
>
> 1BUC
> lidel.txt:pdb1b24.ent lidel NO STRUCTURE
> Chain A 59 63
> lidel.txt:pdb1b3u.ent lidel NO STRUCTURE
> Chain B 15 19
>
=== message truncated ===
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