[overture] Re: parallel ins

  • From: "Kyle K. Chand" <chand1@xxxxxxxx>
  • To: overture@xxxxxxxxxxxxx
  • Date: Fri, 4 Jan 2008 16:41:03 -0800

Hi Joel,

You will need to use the parallel PETSc solvers to use the parallel ins code.  
If you have not built Overture with PETSc you will first need to build PETSc 
and then rebuild Overture.

Regards,
Kyle
  
On Friday 04 January 2008 16:31, Joel Guerrero wrote:
> Hi,
>
> So far I have been using parallel cns, which runs in parallel quite good. 
> Now I'm trying to use parallel ins, but I'm getting this error. Any
> suggestion,
>
> joel
>
> initialize the solution...
>  interpolateAndApplyBoundaryConditions (start) steps=-1 t=0: number of
> array ID's has increased to 684
>
> >>>>>Cgins::project: project the initial conditions <<<<
>
>  $$$$$$$$$$$$$$$ Cgins: updateToMatchGrid(CompositeGrid & cg) $$$$$$$$$$$$
>
>  insBC: after generalizedDivergence: number of array ID's has increased to
> 687 Oges::ERROR:serial generateMatrix called in parallel!
>
> Overture::abort: I am now going to purposely abort so that you can get a
> traceback from a debugger [linux-p8i7:16457] *** Process received signal
> ***
> [linux-p8i7:16457] Signal: Aborted (6)
> [linux-p8i7:16457] Signal code:  (-6)
> Oges::ERROR:serial generateMatrix called in parallel!
>
> Overture::abort: I am now going to purposely abort so that you can get a
> traceback from a debugger [linux-p8i7:16458] *** Process received signal
> ***
> [linux-p8i7:16458] Signal: Aborted (6)
> [linux-p8i7:16458] Signal code:  (-6)
> [linux-p8i7:16458] [ 0] [0xffffe440]
> [linux-p8i7:16458] [ 1] /lib/libc.so.6(abort+0x101) [0xb22481e1]
> [linux-p8i7:16458] [ 2]
> ../../../../cg_parallel.v22/ins/bin/cgins(_ZN8Overture5abortERK7aString+0x5
>a) [0x807989e] [linux-p8i7:16458] [ 3]
> /home/joegi/cfd/overture/Overture_parallel.v22/lib/libOverture.so(_ZN4Oges1
>4generateMatrixERi+0x34) [0xb5b48eca] [linux-p8i7:16458] [ 4]
> /home/joegi/cfd/overture/Overture_parallel.v22/lib/libOverture.so(_ZN4Oges1
>0formMatrixERiS0_NS_23SparseStorageFormatEnumEbb+0xf73) [0xb5b489af]
> [linux-p8i7:16458] [ 5]
> /home/joegi/cfd/overture/Overture_parallel.v22/lib/libOverture.so(_ZN18Yale
>EquationSolver5solveER27doubleCompositeGridFunctionS1_+0x184) [0xb5b8c2de]
> [linux-p8i7:16458] [ 6]
> /home/joegi/cfd/overture/Overture_parallel.v22/lib/libOverture.so(_ZN4Oges5
>solveER27doubleCompositeGridFunctionS1_+0x9a) [0xb5b5a630]
> [linux-p8i7:16458] [ 7]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../ins/lib/libCgins.so(_ZN5Cgi
>ns32solveForTimeIndependentVariablesER12GridFunction+0xa4b) [0xb77d3e4d]
> [linux-p8i7:16458] [ 8]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../ins/lib/libCgins.so(_ZN5Cgi
>ns7projectER12GridFunction+0x16fe) [0xb7733da4] [linux-p8i7:16458] [ 9]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../common/lib/libCgCommon.so(_
>ZN12DomainSolver18initializeSolutionEv+0x1220) [0xb74ace9e]
> [linux-p8i7:16458] [10]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../ins/lib/libCgins.so(_ZN5Cgi
>ns18initializeSolutionEv+0x1e) [0xb78d6de6] [linux-p8i7:16458] [11]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../common/lib/libCgCommon.so(_
>ZN12DomainSolver5setupERKd+0x4a2d) [0xb752acd7] [linux-p8i7:16458] [12]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../common/lib/libCgCommon.so(_
>ZN12DomainSolver26setParametersInteractivelyEb+0x11b49) [0xb73cdb21]
> [linux-p8i7:16458] [13] ../../../../cg_parallel.v22/ins/bin/cgins
> [0x805b645] [linux-p8i7:16458] [14] /lib/libc.so.6(__libc_start_main+0xe0)
> [0xb2232fe0] [linux-p8i7:16458] [15]
> ../../../../cg_parallel.v22/ins/bin/cgins(_ZN3MPI3Win4FreeEv+0x10d)
> [0x805acd1] [linux-p8i7:16458] *** End of error message ***
> [linux-p8i7:16457] [ 0] [0xffffe440]
> [linux-p8i7:16457] [ 1] /lib/libc.so.6(abort+0x101) [0xb22511e1]
> [linux-p8i7:16457] [ 2]
> ../../../../cg_parallel.v22/ins/bin/cgins(_ZN8Overture5abortERK7aString+0x5
>a) [0x807989e] [linux-p8i7:16457] [ 3]
> /home/joegi/cfd/overture/Overture_parallel.v22/lib/libOverture.so(_ZN4Oges1
>4generateMatrixERi+0x34) [0xb5b51eca] [linux-p8i7:16457] [ 4]
> /home/joegi/cfd/overture/Overture_parallel.v22/lib/libOverture.so(_ZN4Oges1
>0formMatrixERiS0_NS_23SparseStorageFormatEnumEbb+0xf73) [0xb5b519af]
> [linux-p8i7:16457] [ 5]
> /home/joegi/cfd/overture/Overture_parallel.v22/lib/libOverture.so(_ZN18Yale
>EquationSolver5solveER27doubleCompositeGridFunctionS1_+0x184) [0xb5b952de]
> [linux-p8i7:16457] [ 6]
> /home/joegi/cfd/overture/Overture_parallel.v22/lib/libOverture.so(_ZN4Oges5
>solveER27doubleCompositeGridFunctionS1_+0x9a) [0xb5b63630]
> [linux-p8i7:16457] [ 7]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../ins/lib/libCgins.so(_ZN5Cgi
>ns32solveForTimeIndependentVariablesER12GridFunction+0xa4b) [0xb77dce4d]
> [linux-p8i7:16457] [ 8]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../ins/lib/libCgins.so(_ZN5Cgi
>ns7projectER12GridFunction+0x16fe) [0xb773cda4] [linux-p8i7:16457] [ 9]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../common/lib/libCgCommon.so(_
>ZN12DomainSolver18initializeSolutionEv+0x1220) [0xb74b5e9e]
> [linux-p8i7:16457] [10]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../ins/lib/libCgins.so(_ZN5Cgi
>ns18initializeSolutionEv+0x1e) [0xb78dfde6] [linux-p8i7:16457] [11]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../common/lib/libCgCommon.so(_
>ZN12DomainSolver5setupERKd+0x4a2d) [0xb7533cd7] [linux-p8i7:16457] [12]
> /home/joegi/cfd/overture/cg_parallel.v22/ins/../common/lib/libCgCommon.so(_
>ZN12DomainSolver26setParametersInteractivelyEb+0x11b49) [0xb73d6b21]
> [linux-p8i7:16457] [13] ../../../../cg_parallel.v22/ins/bin/cgins
> [0x805b645] [linux-p8i7:16457] [14] /lib/libc.so.6(__libc_start_main+0xe0)
> [0xb223bfe0] [linux-p8i7:16457] [15]
> ../../../../cg_parallel.v22/ins/bin/cgins(_ZN3MPI3Win4FreeEv+0x10d)
> [0x805acd1] [linux-p8i7:16457] *** End of error message ***
> mpirun noticed that job rank 0 with PID 16457 on node linux-p8i7 exited on
> signal 6 (Aborted). 1 additional process aborted (not shown)
>
>
>
>
>
>      
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-- 
Kyle K. Chand
mailto:chand1@xxxxxxxx
phoneto:  (925)  422 7740

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