Fifth! Ungapped sequence as Fasta would do me nicely Regards, Dan On 21/07/2010 14:03, Peter wrote:
On Wed, Jul 21, 2010 at 1:49 PM, Davide Scaglione<gianza@xxxxxxxxxx> wrote:Fourth!Wow - I wasn't expecting such interest. I've just looked at the code and I'm afraid there is a catch: It was using Biopython with some experimental stuff that isn't in the main release (and may never be). In order to be useful to you guys, I'd have to re-write it to use the basic ACE parsing in standard Biopython... but that shouldn't take too long. What output file format would suit you all? Just the ungapped sequence as FASTA? Peter
-- Daniel Depledge PhD Research Associate Division of Infection& Immunity University College London Windeyer Building 46 Cleveland St W1T 4JF