[mira_talk] provide known repeats

Hi Bastien,

the last assembly worked fine and now I have at least 3 % of my fish genome 
(simply too low coverage and to few data but I have to work with that). But I 
have another question (and maybe another feature): Is it possible to provide a 
file that contains already known repeats that should be considered for assembly 
? Or if I masked the read with RepeatMasker first can mira use the information 
for assembly ?

On the other hand, is it neccessary ? Would it improve the repeat tackling ?

Greets,

Andreas

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Andreas Petzold
Genome Analysis
Fritz Lipmann Institute
Beutenbergstrasse 11, D-07745 Jena
voice : ++49-3641-656488
fax   : ++49-3641-656488
email : andpet@xxxxxxxxxxxxxx

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