[mira_talk] Re: (no subject)
- From: "Mendez Garcia, Celia" <cmendezg@xxxxxxxxxxxx>
- To: "mira_talk@xxxxxxxxxxxxx" <mira_talk@xxxxxxxxxxxxx>
- Date: Wed, 23 Jul 2014 00:17:22 +0000
Hello Bastien,
thanks. It worked by re-trying. 256 GB is the amount of memory I'm using. Just
1 CPU core...
Another tiny tiny thing: I'm mapping several genomes against a reference and
always get just one contig. My supervisor asks how come. What should I reply to
this, I mean, is this usual? This is basically good news, but I guess most
people here use Newbler for 454 and Velvet for Illumina data and you don't get
this using those that easily [actually we've been using Velvet for this and
getting ~200 contigs for what MIRA got 1].
Thanks again.
Celia
________________________________
From: mira_talk-bounce@xxxxxxxxxxxxx [mira_talk-bounce@xxxxxxxxxxxxx] on behalf
of Bastien Chevreux [bach@xxxxxxxxxxxx]
Sent: Friday, July 18, 2014 6:11 PM
To: mira_talk@xxxxxxxxxxxxx
Subject: [mira_talk] Re: (no subject)
Yeah, right ... and your mail *was* to MIRA talk. Looks like I confused a
couple of things, sorry :-)
On July 18, 2014 at 12:24 AM "Mendez Garcia, Celia" <cmendezg@xxxxxxxxxxxx>
wrote:
Hi,
I get this log file when mapping to a reference bacterial genome.
What's the problem here?
Thanks,
Celia
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