[mira_talk] Re: mapping solexa

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Wed, 13 Jan 2010 16:51:35 +0100

On Mittwoch 13 Januar 2010 Brian Forde wrote:
> One more question regarding mapping. I noticed that in at least one of my
> reference contigs he reference sequence its self does not appear till
> position 25 on the new consensus. Does mapping in mira extend contig ends?

Yes it does, but only with reads that still have an overlap with the reference 
sequence.

Would that be a problem?

Regards,
  Bastien

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