[mira_talk] Re: mapping solexa

Thanks Lionel

On Wed, Jan 13, 2010 at 1:04 PM, Lionel Guy <guy.lionel@xxxxxxxxx> wrote:

> Hi Brian,
>
> They are Coverage Equivalent Reads, reads that are merged to spare memory.
> Bastien has explained a bit more on these in a previous thread:
> http://www.freelists.org/post/mira_talk/Strange-output-reads-from-Solexa-assembly,1
>
> (If the link doesn't work, search for "cer" in the list archives)
>
> Best,
>
> Lionel
>
>
> On 13 Jan 2010, at 13:58 , Brian Forde wrote:
>
>  Hi All,
>>
>> I have just finished mapping solexa reads to a 454 assembly and when i
>> viewed it in gap each contig seems to contain numerous reads called
>> _cer_sxa_XXXX (where X is a number). Can anyone tell me what these reads
>> are?
>>
>> regards
>>
>> Brian
>>
>
>
>
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