[mira_talk] Re: highly heterozygous assembly
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Mon, 18 Aug 2014 21:10:23 +0200
On 16 Aug 2014, at 18:31 , Adrian Pelin <apelin20@xxxxxxxxx> wrote:
> I sent an email a few days ago attached below about highly heterozygous
> assemblies.
> I was wondering if there is any way to adjust the parameters to warn MIRA of
> sample variation.
Question remains: what do you understand by “warning”? In default mode, MIRA
will always assemble contigs according to “what was sequences”, i.e., not merge
“SNPs” or similar things in-between haplotypes.
B.
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