[mira_talk] Re: error in compilation mira-2.9.46

good, thank you for this help Bastien.

i'm going to work on my servers which have different
architecture(see below) to compile mira-2.9.46 , then make test on.
So, I have to install libboost.*1.35-dev libboost.*1.35.0 to do this.
Then make test using a set of data(435000 454-Titanium reads),
i have already use this set of data with previous mira version 2.9.43.

I'll tell you for each machine(if compilation succeed) the elapsed time
i obtain to compute the set of data.

1°/ x86 servers
Machine features:
- Dell PowerEdge 2600
- CPU: 2x Intel Xeon @ 3200Mhz
- Memory: 4GB RAM
- OS: Linux Debian / Debian release 4.1.2-25
- Kernel: 2.6.26-2-686
- gcc version 4.1.3

Machine features:
- IBM eServer 366
- CPU: 2x Intel Xeon @ 3000Mhz
- Memory: 4GB RAM
- OS: Linux Debian / Debian release 4.1.1-21
- Kernel: 2.6.18-5-xen-vserver-686
- gcc version 4.1.2

/***********************************/

2°/ x86_64 servers
Machine features:
- HP ProLiant DL585-G2
- CPU: 4x Dual-Core AMD Opteron Processor 8216 @ 2400MHz
- Memory: 64GB RAM
- OS: Linux Redhat / CentOS release 4.6 (Final)
- Kernel: 2.6.9-67.0.4.EL
- gcc version 3.4.6

Machine features:
- HP ProLiant DL360
- CPU: 2x Intel Xeon with HyperThreading @ 3400MHz
- Memory: 8GB RAM
- OS: Linux Redhat / CentOS release 4.6 (Final)
- Kernel: 2.6.9-67.0.4.EL
- gcc version 3.4.6


Regards,
Laurent --

Bastien Chevreux a écrit :

On Donnerstag 25 Juni 2009 Laurent MANCHON wrote:

[...]
hoops, i have debian Etch, what a pity.
i'm trying to look for new flex library in etch-backports.
In case you haven't installed a new flex version yet: ccould you please try http://www.chevreux.org/tmp/mira-2.9.46x2.tar.bz2
While this would still not compile, I very much hope the configure script now correctly recognises your flex is too old. 

Regards,
  Bastien

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