[mira_talk] Re: can't find miraconvert

  • From: Juan Daniel Montenegro Cabrera <jdmontenegroc@xxxxxxxxx>
  • To: "mira_talk@xxxxxxxxxxxxx" <mira_talk@xxxxxxxxxxxxx>
  • Date: Mon, 14 Apr 2014 11:56:34 +1000

Sure,

You need to use

miraconvert -f caf -t ace your.caf your.ace

and it does the magic. You can apply as many filters as you want. For all
available filters and options:

miraconvert -h

Cheers,

Juan Montenegro

2014-04-14 11:50 GMT+10:00 <Theo.Allnutt@xxxxxxxx>:

>  Hi,
>
>
>
> I finally got Mira 4 to run, but got a message that the large contigs
> could not be converted and to run ' extractLargeContigs.sh'
>
> which I did but then got this in the log:
>
>
>
> ./extractLargeContigs.sh: 16: ./extractLargeContigs.sh: miraconvert: not
> found
>
>
>
> Also, the TCS file only has this in it:
>
> "TCS output currently not available, please contact the author."
>
>
>
> My CAF file is 1.6GB but will not open in Tablet, my usual viewer (Consed
> won't install on my system). Is there a way to convert it to ACE in Mira 4?
> The Reference Manual does not give an example of the syntax for the
> parameter.
>
>
>
> Thanks.
>

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