[mira_talk] Re: caf2gap
- From: Richard Harrison <richard.harrison@xxxxxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Fri, 4 Dec 2009 21:25:47 +0000
Dear Bastien,
gap4 runs fine on osx, just this caf2gap thing prevents me from using
it. However, I've installed Maviant (http://snp.agrsci.dk/maviant/)
and that allows me to view ace files. I'm also getting an account on
a linux machine so I can use the precompiled caf2gap program.
BTW, I'm really happy with this assembler. It's the only one that I've
ever managed to get up and running well in under a day on the mac!
All the best,
Richard
On 3 Dec 2009, at 22:02, Richard Harrison wrote:
Dear all,
I have recently installed mira and it seems to be working nicely.
The same cannot be said for caf2gap (btw the commonly stated link is
now dead but it can still be obtained from ftp://ftp.sanger.ac.uk/pub/badger/)
. I was wondering if anyone has had any luck compiling caf2gap on
mac osx 10.5.8 ?
I am out of my depth, I think it need some other libraries, but I
don't know what/where to get them.
Alternatively, does anyone have any suggestions as to what I can use
instead of gap4?
Best wishes,
Richard Harrison
The University of Edinburgh is a charitable body, registered in
Scotland, with registration number SC005336.
The University of Edinburgh is a charitable body, registered in
Scotland, with registration number SC005336.
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