[mira_talk] Re: adaptor trim

  • From: Huang Yi <huang.y.hy@xxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Wed, 11 Nov 2015 21:57:19 +0800

thank you!

2015-11-11 21:54 GMT+08:00 Bastien Chevreux <bach@xxxxxxxxxxxx>:

On 11 Nov 2015, at 8:49 , Huang Yi <huang.y.hy@xxxxxxxxx> wrote:

[…]
My other question is: there is "Num. reads assembled" in file
"info_assembly.txt", which I think shows how many reads were used for MIRA
assembly. This number is less than what I feed to MIRA. Is it possible to
pull those reads out?


Yes. Reads mapped/assembled are tracked in the
“*projectname*_info_contigreadlist.txt”
file, reads not mapped/assembled (and the reason why) in the file “
*projectname*_info_debrislist.txt”.

B.



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