[mira_talk] Re: Vector screen
- From: Jose Blanca <jblanca@xxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Wed, 16 Mar 2011 13:18:34 +0100
El 16/03/11 12:14, Tony Travis escribió:
On 16/03/11 08:31, Jose Blanca wrote:
Hi, Jose.
That looks interesting!
I used to use "cross_match" from the Phed/Phrap pipeline, but recently
decided to start using "ssaha2" instead after reading about other people
using it on the MIRA list. It seems to work quite well, but I'm
interested in trying out your pipeline on our Beowulf cluster here.
Right now the parallelization works with condor, I don't know how a
Beowulf cluster organizes the job. The parallelization library that we
use was created to use other systems by writing a plugin, but that
pluging should be written.
Best regards,
--
Jose M. Blanca Postigo
Instituto Universitario de Conservacion y
Mejora de la Agrodiversidad Valenciana (COMAV)
Universidad Politecnica de Valencia (UPV)
Edificio CPI (Ciudad Politecnica de la Innovacion), 8E
46022 Valencia (SPAIN)
Tlf.:+34-96-3877000 (ext 88473)
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