[mira_talk] Using 2 file sets as input
- From: Jan van Haarst <jan@xxxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Thu, 4 Jun 2009 09:57:08 +0200
Hi all,
Is it possible to have multiple file sets (fasta, qual & xml) in a
single assembly ?
The reason I need this, is that something went wrong with an
experiment, and thus half of the reads from a sff file contain a
primer at the start of the read and half doesn't.
I have already split the sff file in two, and used sff_extract to
generate two sets of files from the two sff files, so I now have two
sets of files that are both without primer.
I tried simple concatenation, but as you would expect, the XML parser
doesn't like it :-)
So, is it possible to add 2 sets to mira, or should I just fix the XML ?
--
Dag,
Jan
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