[mira_talk] Re: Subject: De-novo hybrid assemblies ( Solexa + ...)
- From: Bastien Chevreux <bach@xxxxxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Sun, 18 Oct 2009 18:48:18 +0200
On Samstag 17 Oktober 2009 Chia Jing Yi wrote:
> Nobody know the answer of my problem?
> Is it too confusing?
> After run 454 reads by using MIRA and BAMBUS, I extract the longest
> scaffold and treat it as a backbone. I hope that I able to polish this
> longest scaffold by using Illumina reads to get better assembly result.
> I just confusing how to use MIRA to polish my longest scaffold and get
> better assembly result.
Hello Chia (Chia Ying?),
to me this looks like a normal mapping assembly that you want to do. Is
something unclear in the section "Mapping assemblies" in the guide for Solexa
data? If yes, I'll need to improve :-)
Regards,
Bastien
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