[mira_talk] Re: Question: padded or unpadded outputs
- From: Peter Cock <p.j.a.cock@xxxxxxxxxxxxxx>
- To: Bastien Chevreux <bach@xxxxxxxxxxxx>, "mira_talk@xxxxxxxxxxxxx" <mira_talk@xxxxxxxxxxxxx>
- Date: Thu, 19 Mar 2015 18:30:51 +0000
On Thu, Mar 19, 2015 at 6:20 PM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote:
> On 19 Mar 2015, at 18:45 , Peter Cock <p.j.a.cock@xxxxxxxxxxxxxx> wrote:
>> Bastien - is there a recommend way to see in the MAF v2 format
>> if a read is part one or part two of a pair?
>
> Some doc update needed I think. Yes, the TS (Template Segment)
> line: the first gets a “1”, the last a “255”, inbetween get 2 to 254.
> For sequencing technologies with pairs, that makes it have just
>“1” and “255”.
>
> B.
Lovely - I looked at that but the 255 surprised me, so I didn't
like to guess.
Peter
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