[mira_talk] Quality values for Illumina

  • From: Arun Rawat <rawat_arun@xxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Tue, 12 Jul 2011 16:06:35 -0700 (PDT)

Hi Bastein,

The new Illumina software outputs the quality value in offset of 33 ASCII as 
against 84 ASCII offset. Do you think it will affect my cleaning quality if I 
give following CL:qc=yes:qcmq=5:qcwl=5 and what might be the solution for this?

Thanks,
A

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