[mira_talk] MIRA results have a leading space in strain name
- From: Andrej Benjak <abenjak@xxxxxxxxx>
- To: mira_talk@xxxxxxxxxxxxx
- Date: Tue, 02 Dec 2014 15:21:07 +0100
Dear Bastien,
MIRA 4.9.3 produced files like this:
..._mapping_out_ref...
..._mapping_out_ sample1...
(Note the space in front of "sample1")
For a manifest that went like this:
###############
job = genome,mapping,accurate
readgroup
is_reference
data =/blah/.gbk
technology = text
strain = ref
readgroup = Illumina-PE1
autopairing
data = /blah...
technology = solexa
strain = sample1
###############
The asnp files also contain the leading space for sample names, but the
reference name is fine.
I didn't observe this in previous MIRA versions, but didn't do any
particular testing either.
Best,
Andrej
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