[mira_talk] Re: MIRA consensus tags in ace file

  • From: Bastien Chevreux <bach@xxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Mon, 3 Aug 2009 20:33:29 +0200

On Montag 03 August 2009 Tony Travis wrote:
> I also upgraded to Consed 19.0 as he suggested, and this fixes the
> problem with the comments, but consed still fails to parse the RT tags
> in the (edited) ace file created by MIRA:
> [...]
> > exception thrown: ace file error detected from source file
> > parseAceFile.cpp at 1077 Error in file temp.ace at line 12213273.  Line:
> > FI7H5NB02G5BZ7 HAF5 MIRA 5 5 020202:121212
> >
> > RT tag line should be:
> > <readname> <tag type> <tag source> <padded read pos start> <padded read
> > pos end> <date YYMMDD:HH24MISS> where the padded read pos's are from the
> > left end and tag type must be recognized by consed but tag type is not
> > recognized

Ummm ... consed complains it does not know the tag type. Did you tell consed 
about the MIRA tags?

Append the contents of the file "support/consedtaglib.txt" to the 
corresponding consedtaglib of your system then all should be well (I hope).

Regards,
  Bastien


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