[mira_talk] Re: MIRA 3 release candidate 1

On Mittwoch 29 Juli 2009 Andrzej Migdalski wrote:
> i ran mira with: -fasta -caf -project=kp15
> -job=denovo,genome,454,sanger,accurate -SK:not=4 454_SETTINGS -ED:ace=yes
> SANGER_SETTINGS -LR:mxti=no -AS:mrl=100 -noclipping 

New version 3rc1b which fixess an internal bug for mixed loading of file types.

Hmmm ... "-fasta -caf" shouldn't have worked like it did (it should set all 
input files to caf as this comes last), I fixed that oversight.

You need to write: "... SANGER_SETTINGS -LR:ft=caf ..." to change loading of 
Sanger data to caf (no need to change 454 settinges, fasta is default there).

Regards,
  Bastien




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