[mira_talk] Re: Collecting DNA from bacterial cultures, was: suggestion for sequencing companies
- From: Estefania Mancini <estefania.mancini@xxxxxxxxxx>
- To: mira talk <mira_talk@xxxxxxxxxxxxx>
- Date: Thu, 19 Apr 2012 16:57:30 -0300 (ART)
Dear all,
I was reading carefully last mails about collecting DNA from bacterial cultures
and I was wondering how to analyse ORI region in genomes already assembled
which resulted in many contigs.
I've tried with the combination Glimmer + seqinr{oriloc} (R library) but, it is
useful for closed genomes in 1 chromosome.
I usually work with 454 sequences and with bacterial genomes with no reference
to align.
Do you have better ideas for do this?
Thanks in advance,
Estefania
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- » [mira_talk] Re: Collecting DNA from bacterial cultures, was: suggestion for sequencing companies- Bastien Chevreux