[mira_talk] Re: Assembly

  • From: Sharmista Saha <sharmistasaha@xxxxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Sat, 3 Oct 2009 19:17:29 +0530

Solexa: Filter out (A hard)

Solexa: Filter out T (soft)
ccca++c+cc+++++accccc+c++ccc+cc++c+cc++c+++c+++c++c+++ccac+c

Consensus contains:    A: 49673    C: 30174    G: 29530    T: 50924    N: 0
            IUPAC: 0    Funny: 0    *: 0
for mapping they have shown only c' and a's why so?

It will be better if the mira log-assembly could be illustrated in full.

Thanks and Regards,
Sharmistha

On Sat, Oct 3, 2009 at 6:37 PM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote:

> >From: Sharmista Saha
> > Thus I am not able to interpret the details of my output results. If
> anyone can direct me with some answers shall be grateful.
>
> What exactly don't you understand?
>
> Regards,
>  Bastien
>
>
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