[mira_talk] Re: Assembly

  • From: Sharmista Saha <sharmistasaha@xxxxxxxxxxxxxx>
  • To: mira_talk@xxxxxxxxxxxxx
  • Date: Fri, 2 Oct 2009 18:57:25 +0530

Okays.

Now I am following Lionel only.

One quick simple doubt I know, fasta and fastq file, but what is this fasta
qual? I did not get that? if you can let me know, it will be good.


Thanks and regards,
Sharmistha



On Fri, Oct 2, 2009 at 6:30 PM, Bastien Chevreux <bach@xxxxxxxxxxxx> wrote:

>
> You are confusing the formats:
>
> FASTA + FASTA quality   (http://en.wikipedia.org/wiki/FASTA_format)
>
>  versus
>
> FASTQ   (http://en.wikipedia.org/wiki/FASTQ_format )
>
> As the story unravels and the puzzle comes together from the bits and
> pieces of your mails, it seems that you tried all the time to load a FASTQ
> file as FASTA quality file. This obviously cannot work.
>
> Now, please follow step by step the advice Lionel just gave you in his last
> mail and things should be running smoothly.
>
> Regards,
>   Bastien
>
>
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